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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY59643 Canola extracellular 50.47 72.97
CDX79465 Canola extracellular 50.47 62.79
CDY37751 Canola endoplasmic reticulum, extracellular, plasma membrane 67.29 32.88
CDX86608 Canola endoplasmic reticulum 65.42 31.96
CDY15521 Canola endoplasmic reticulum 64.49 31.51
CDY17139 Canola cytosol, extracellular 65.42 31.39
CDY19450 Canola cytosol, extracellular 65.42 31.39
CDY18254 Canola endoplasmic reticulum 64.49 31.36
CDX89793 Canola endoplasmic reticulum 64.49 31.36
CDX79510 Canola endoplasmic reticulum 64.49 31.08
CDX84702 Canola endoplasmic reticulum 63.55 30.63
VIT_05s0136g00290.t01 Wine grape extracellular 62.62 30.45
CDY19154 Canola cytosol 61.68 30.0
AT1G04760.2 Thale cress cytosol 61.68 30.0
CDY12188 Canola cytosol 61.68 30.0
CDY10053 Canola endoplasmic reticulum 61.68 30.0
CDY48531 Canola cytosol 61.68 30.0
CDX84731 Canola cytosol 61.68 30.0
GSMUA_Achr9P11030_001 Banana cytosol 60.75 29.68
CDY06150 Canola cytosol 60.75 29.55
GSMUA_Achr8P15290_001 Banana cytosol, endoplasmic reticulum 59.81 29.22
GSMUA_Achr7P01760_001 Banana plasma membrane 59.81 29.22
GSMUA_Achr9P25440_001 Banana cytosol, vacuole 58.88 28.77
GSMUA_Achr4P22260_001 Banana cytosol, extracellular 58.88 28.77
Os07t0194000-01 Rice plasma membrane 58.88 28.64
EER96027 Sorghum extracellular 58.88 28.38
Zm00001d007767_P001 Maize extracellular 58.88 28.38
OQU90815 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 57.94 28.18
Os03t0803000-01 Rice plasma membrane 57.94 28.18
TraesCS5B01G457700.1 Wheat vacuole 57.01 27.48
TraesCS5D01G459900.1 Wheat vacuole 57.01 27.48
GSMUA_Achr2P17740_001 Banana cytosol 56.07 27.4
HORVU5Hr1G107510.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 57.01 27.35
TraesCS5A01G449900.1 Wheat unclear 57.01 27.35
Zm00001d013055_P002 Maize extracellular, plasma membrane 57.01 25.85
CDY22900 Canola cytosol, plasma membrane, plastid 53.27 25.68
CDY44179 Canola cytosol 52.34 25.23
GSMUA_Achr8P03260_001 Banana cytosol, mitochondrion, plasma membrane, plastid 51.4 25.0
Zm00001d019091_P002 Maize vacuole 58.88 24.14
AT2G32670.1 Thale cress endoplasmic reticulum, golgi 62.62 23.51
CDY07551 Canola cytosol 48.6 21.67
CDX67594 Canola cytosol 47.66 21.16
CDX76153 Canola cytosol 47.66 21.07
CDX78228 Canola cytosol, plasma membrane 46.73 20.83
CDX73490 Canola plasma membrane 46.73 20.75
CDY13199 Canola plasma membrane 36.45 19.6
CDX69781 Canola plasma membrane 28.97 14.03
CDX97084 Canola plasma membrane 28.97 14.03
CDY61387 Canola endoplasmic reticulum, plasma membrane 28.04 13.7
CDX75224 Canola endoplasmic reticulum, plasma membrane 28.04 13.64
CDX68821 Canola endoplasmic reticulum, plasma membrane 27.1 13.18
CDX70999 Canola endoplasmic reticulum 27.1 13.12
CDY09133 Canola endoplasmic reticulum 27.1 13.12
CDX88799 Canola plasma membrane 27.1 13.12
TraesCS3B01G193500.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 52.34 12.5
CDY48527 Canola cytosol 7.48 11.11
CDX79466 Canola endoplasmic reticulum 16.82 10.23
CDY22757 Canola cytosol 18.69 9.9
CDY59642 Canola endoplasmic reticulum 13.08 7.87
CDY19156 Canola cytosol 10.28 7.64
CDY23768 Canola endoplasmic reticulum, extracellular, plasma membrane 11.21 7.19
Solyc12g098170.1.1 Tomato cytosol 17.76 6.23
PGSC0003DMT400043452 Potato cytosol 20.56 5.96
Protein Annotations
EnsemblPlants:CDY23767EnsemblPlantsGene:GSBRNA2T00024114001Gene3D:3.30.450.50GO:A0A078GF74GO:GO:0006810GO:GO:0008150
GO:GO:0016192InterPro:IPR010908InterPro:Longin-like_dom_sfInterPro:Longin_domPANTHER:PTHR21136PANTHER:PTHR21136:SF120
PFAM:PF13774PFscan:PS50859ProteinID:CDY23767ProteinID:CDY23767.1SUPFAM:SSF64356UniParc:UPI0004EEB960
UniProt:A0A078GF74MapMan:22.7.5.1::::
Description
BnaC04g43550DBnaC04g43550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF74]
Coordinates
chrLK032148:+:341315..341783
Molecular Weight (calculated)
12044.6 Da
IEP (calculated)
8.949
GRAVY (calculated)
0.277
Length
107 amino acids
Sequence
(BLAST)
001: MAQQSLIYSF VARGTVILVD FTDFKGNFTS IAAQCLQKLP SSNNKVIYNC DGHTFNYLVE NGFKEQALFC ICYSKFSALL FLAGWFRISL PLIVSKGSWV
101: RISPKES
Best Arabidopsis Sequence Match ( AT2G33120.2 )
(BLAST)
001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE NGFSESKYCS ISYCVVAVDS AGRQIPMAFL ERVKEDFNKR
101: YGGGKAATAQ ANSLNKEFGS KLKEHMQYCM DHPDEISKLA KVKAQVSEVK GVMMENIEKV LDRGEKIELL VDKTENLRSQ AQDFRTQGTQ MRRKMWFQNM
201: KIKLIVLAII IALILIIILS ICGGFNCGK
Arabidopsis Description
SAR1AT2G33120 protein [Source:UniProtKB/TrEMBL;Acc:B9DH97]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.