Factsheet for GSMUA_Achr4P22260_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P01760_001	Banana	plasma membrane	94.06	94.06
Os07t0194000-01	Rice	plasma membrane	93.15	92.73
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	92.24	92.24
GSMUA_Achr9P11030_001	Banana	cytosol	91.78	91.78
EER96027	Sorghum	extracellular	92.24	90.99
Zm00001d007767_P001	Maize	extracellular	92.24	90.99
GSMUA_Achr9P25440_001	Banana	cytosol, vacuole	90.87	90.87
VIT_05s0136g00290.t01	Wine grape	extracellular	90.87	90.45
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	90.87	90.45
Os03t0803000-01	Rice	plasma membrane	90.41	90.0
Bra022893.1-P	Field mustard	cytosol	88.58	88.18
CDX84731	Canola	cytosol	88.58	88.18
GSMUA_Achr2P17740_001	Banana	cytosol	88.13	88.13
CDX89793	Canola	endoplasmic reticulum	88.13	87.73
Bra015345.1-P	Field mustard	endoplasmic reticulum	88.13	87.73
CDY12188	Canola	cytosol	88.13	87.73
Bra005568.1-P	Field mustard	cytosol	88.13	87.73
CDY18254	Canola	endoplasmic reticulum	88.13	87.73
CDX86608	Canola	endoplasmic reticulum	87.67	87.67
CDY15521	Canola	endoplasmic reticulum	86.76	86.76
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	86.3	85.91
Bra032493.1-P	Field mustard	cytosol	85.84	85.45
CDY19154	Canola	cytosol	85.84	85.45
CDY17139	Canola	cytosol, extracellular	86.76	85.2
Bra005523.1-P	Field mustard	cytosol, extracellular	86.76	85.2
TraesCS5D01G459900.1	Wheat	vacuole	86.3	85.14
TraesCS5B01G457700.1	Wheat	vacuole	86.3	85.14
CDY06150	Canola	cytosol	85.39	85.0
Bra021804.1-P	Field mustard	cytosol	85.39	85.0
Bra030588.1-P	Field mustard	endoplasmic reticulum	84.93	84.93
HORVU5Hr1G107510.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.3	84.75
TraesCS5A01G449900.1	Wheat	unclear	86.3	84.75
CDY19450	Canola	cytosol, extracellular	86.3	84.75
CDX84702	Canola	endoplasmic reticulum	85.84	84.68
CDX79510	Canola	endoplasmic reticulum	85.84	84.68
Bra022926.1-P	Field mustard	endoplasmic reticulum	85.84	84.68
CDY48531	Canola	cytosol	84.93	84.55
CDY10053	Canola	endoplasmic reticulum	84.93	84.55
CDX79466	Canola	endoplasmic reticulum	65.3	81.25
CDY19156	Canola	cytosol	51.6	78.47
CDY59643	Canola	extracellular	26.48	78.38
CDY59642	Canola	endoplasmic reticulum	63.01	77.53
Zm00001d013055_P002	Maize	extracellular, plasma membrane	82.19	76.27
Bra021828.1-P	Field mustard	endoplasmic reticulum, extracellular	76.26	76.26
Zm00001d019091_P002	Maize	vacuole	90.87	76.25
CDY37751	Canola	endoplasmic reticulum, extracellular, plasma membrane	75.8	75.8
GSMUA_Achr8P03260_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	70.78	70.45
CDY23768	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.42	70.06
CDX79465	Canola	extracellular	26.94	68.6
GSMUA_Achr9P30970_001	Banana	cytosol	62.56	60.09
CDY23767	Canola	extracellular	28.77	58.88
GSMUA_Achr8P32930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.64	56.72
AT3G24890.2	Thale cress	cytosol	27.85	49.19
GSMUA_Achr9P09180_001	Banana	endoplasmic reticulum, plasma membrane	39.27	39.09
GSMUA_Achr6P35140_001	Banana	plasma membrane	38.81	38.64
GSMUA_Achr11P...	Banana	endoplasmic reticulum	37.9	38.07
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	36.53	36.7
TraesCS3B01G193500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.06	35.71
PGSC0003DMT400043452	Potato	cytosol	52.97	31.44
Solyc12g098170.1.1	Tomato	cytosol	16.89	12.13

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	ncoils:Coil	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	EnsemblPlantsGene:GSMUA_Achr4G22260_001
EnsemblPlants:GSMUA_Achr4P22260_001	EnsemblPlants:GSMUA_Achr4T22260_001	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
UniProt:M0SR39	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859
PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF120	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356
InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI000294C4A5	SEG:seg	:	:

Description

Putative vesicle-associated membrane protein 726 [Source:GMGC_GENE;Acc:GSMUA_Achr4G22260_001]

Coordinates

chr4:-:22578554..22582088

Molecular Weight (calculated)

24854.4 Da

IEP (calculated)

9.507

GRAVY (calculated)

-0.194

Length

219 amino acids

Sequence
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFQGNFTG IAAQCLQKLP SSNNRFTYNG DGHTFNYLVE DGYTYCVVAV ESVGRQIPIA FLDRIKEDFN KRYGGGKAAT
101: ARANSLNREF GSKLKEHMQY CVDHPEEISK LAKVKAQVSE VKGVMMENIE KVLERGEKIE LLVDKTENLR SQAQDFRQQG TKMRRKMWMK NMKIKLIVLG
201: IIIALILIII LSVCHGFKC

Best Arabidopsis Sequence Match ( AT1G04760.2 )
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT

Arabidopsis Description

VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.