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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79465 Canola extracellular 87.84 75.58
CDY23767 Canola extracellular 72.97 50.47
CDY12188 Canola cytosol 90.54 30.45
CDX84731 Canola cytosol 87.84 29.55
AT1G04760.2 Thale cress cytosol 85.14 28.64
CDY48531 Canola cytosol 85.14 28.64
CDY19154 Canola cytosol 85.14 28.64
VIT_05s0136g00290.t01 Wine grape extracellular 82.43 27.73
CDX86608 Canola endoplasmic reticulum 81.08 27.4
GSMUA_Achr7P01760_001 Banana plasma membrane 81.08 27.4
CDY15521 Canola endoplasmic reticulum 79.73 26.94
GSMUA_Achr8P15290_001 Banana cytosol, endoplasmic reticulum 79.73 26.94
CDX84702 Canola endoplasmic reticulum 79.73 26.58
GSMUA_Achr4P22260_001 Banana cytosol, extracellular 78.38 26.48
GSMUA_Achr9P11030_001 Banana cytosol 78.38 26.48
CDY37751 Canola endoplasmic reticulum, extracellular, plasma membrane 78.38 26.48
CDY19450 Canola cytosol, extracellular 79.73 26.46
CDY17139 Canola cytosol, extracellular 79.73 26.46
Os07t0194000-01 Rice plasma membrane 78.38 26.36
CDX89793 Canola endoplasmic reticulum 78.38 26.36
CDY06150 Canola cytosol 78.38 26.36
CDY18254 Canola endoplasmic reticulum 78.38 26.36
CDX79510 Canola endoplasmic reticulum 78.38 26.13
Zm00001d007767_P001 Maize extracellular 78.38 26.13
EER96027 Sorghum extracellular 78.38 26.13
GSMUA_Achr9P25440_001 Banana cytosol, vacuole 77.03 26.03
CDY10053 Canola endoplasmic reticulum 77.03 25.91
OQU90815 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 77.03 25.91
Os03t0803000-01 Rice plasma membrane 77.03 25.91
TraesCS5B01G457700.1 Wheat vacuole 75.68 25.23
TraesCS5D01G459900.1 Wheat vacuole 75.68 25.23
HORVU5Hr1G107510.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 75.68 25.11
TraesCS5A01G449900.1 Wheat unclear 75.68 25.11
GSMUA_Achr2P17740_001 Banana cytosol 72.97 24.66
CDY22900 Canola cytosol, plasma membrane, plastid 72.97 24.32
CDY44179 Canola cytosol 71.62 23.87
Zm00001d013055_P002 Maize extracellular, plasma membrane 75.68 23.73
AT2G32670.1 Thale cress endoplasmic reticulum, golgi 86.49 22.46
GSMUA_Achr8P03260_001 Banana cytosol, mitochondrion, plasma membrane, plastid 66.22 22.27
Zm00001d019091_P002 Maize vacuole 78.38 22.22
CDX67594 Canola cytosol 62.16 19.09
CDX76153 Canola cytosol 62.16 19.01
CDY07551 Canola cytosol 60.81 18.75
CDX78228 Canola cytosol, plasma membrane 60.81 18.75
CDX73490 Canola plasma membrane 60.81 18.67
CDY13199 Canola plasma membrane 41.89 15.58
TraesCS3B01G193500.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 70.27 11.61
CDX70999 Canola endoplasmic reticulum 33.78 11.31
CDY61387 Canola endoplasmic reticulum, plasma membrane 32.43 10.96
CDX75224 Canola endoplasmic reticulum, plasma membrane 32.43 10.91
CDX88799 Canola plasma membrane 32.43 10.86
CDY09133 Canola endoplasmic reticulum 32.43 10.86
CDX68821 Canola endoplasmic reticulum, plasma membrane 31.08 10.45
CDX97084 Canola plasma membrane 31.08 10.41
CDX69781 Canola plasma membrane 31.08 10.41
Solyc12g098170.1.1 Tomato cytosol 28.38 6.89
PGSC0003DMT400043452 Potato cytosol 28.38 5.69
CDY48527 Canola cytosol 5.41 5.56
CDY22757 Canola cytosol 14.86 5.45
CDY23768 Canola endoplasmic reticulum, extracellular, plasma membrane 9.46 4.19
CDX79466 Canola endoplasmic reticulum 9.46 3.98
CDY59642 Canola endoplasmic reticulum 8.11 3.37
CDY19156 Canola cytosol 2.7 1.39
Protein Annotations
EnsemblPlants:CDY59643EnsemblPlantsGene:GSBRNA2T00027517001Gene3D:3.30.450.50GO:A0A078J5P8GO:GO:0006810GO:GO:0008150
GO:GO:0016192InterPro:IPR010908InterPro:Longin-like_dom_sfInterPro:Longin_domPANTHER:PTHR21136PANTHER:PTHR21136:SF120
PFAM:PF13774PFscan:PS50859ProteinID:CDY59643ProteinID:CDY59643.1SUPFAM:SSF64356UniParc:UPI0004EE9569
UniProt:A0A078J5P8MapMan:22.7.5.1::::
Description
BnaAnng16150DBnaAnng16150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5P8]
Coordinates
chrLK033791:-:34548..34858
Molecular Weight (calculated)
8501.0 Da
IEP (calculated)
6.491
GRAVY (calculated)
-0.109
Length
74 amino acids
Sequence
(BLAST)
1: MGQQNLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLVE NGFMDLFGHF FYYS
Best Arabidopsis Sequence Match ( AT2G32670.1 )
(BLAST)
001: MDRSVVPISL APFQFLLVFW IFLTSVHTNP NKQQKTVVSL SLWWNSKNRI RGCVWFFFLL RVTRTMGQQN LIYSFVARGT VILVEYTEFK GNFTAVAAQC
101: LQKLPSSNNK FTYNCDGHTF NYLVENGFTY CVVAVESVGR QIPMAFLERV KEDFNKRYGG GKATTAQANS LNREFGSKLK EHMQYCVDHP DEISKLAKVK
201: AQVTEVKGVM MENIEKVLDR GEKIELLVDK TENLRSQAQD FRTQGTKIRR KMWFENMKIK LIVLGIIITL ILIIILSVCG GFKCT
Arabidopsis Description
VAMP725Vesicle-associated membrane protein 725 [Source:UniProtKB/Swiss-Prot;Acc:O48850]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.