Factsheet for GSMUA_Achr8P03260_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 3
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	73.18	73.52
GSMUA_Achr9P11030_001	Banana	cytosol	72.73	73.06
Os07t0194000-01	Rice	plasma membrane	72.27	72.27
GSMUA_Achr9P25440_001	Banana	cytosol, vacuole	71.82	72.15
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.91	70.91
Os03t0803000-01	Rice	plasma membrane	70.91	70.91
GSMUA_Achr4P22260_001	Banana	cytosol, extracellular	70.45	70.78
GSMUA_Achr2P17740_001	Banana	cytosol	70.45	70.78
EER96027	Sorghum	extracellular	71.36	70.72
Zm00001d007767_P001	Maize	extracellular	71.36	70.72
VIT_05s0136g00290.t01	Wine grape	extracellular	70.45	70.45
GSMUA_Achr7P01760_001	Banana	plasma membrane	69.55	69.86
CDY18254	Canola	endoplasmic reticulum	69.09	69.09
CDX89793	Canola	endoplasmic reticulum	69.09	69.09
Bra015345.1-P	Field mustard	endoplasmic reticulum	69.09	69.09
CDX86608	Canola	endoplasmic reticulum	68.64	68.95
CDY15521	Canola	endoplasmic reticulum	68.18	68.49
TraesCS5D01G459900.1	Wheat	vacuole	69.09	68.47
TraesCS5B01G457700.1	Wheat	vacuole	69.09	68.47
CDX84731	Canola	cytosol	68.18	68.18
Bra022893.1-P	Field mustard	cytosol	68.18	68.18
HORVU5Hr1G107510.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.09	68.16
TraesCS5A01G449900.1	Wheat	unclear	69.09	68.16
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	67.73	67.73
Bra005568.1-P	Field mustard	cytosol	67.27	67.27
CDY12188	Canola	cytosol	67.27	67.27
Bra030588.1-P	Field mustard	endoplasmic reticulum	66.82	67.12
CDY19154	Canola	cytosol	66.82	66.82
Bra032493.1-P	Field mustard	cytosol	66.82	66.82
Bra005523.1-P	Field mustard	cytosol, extracellular	67.73	66.82
CDY17139	Canola	cytosol, extracellular	67.73	66.82
Bra022926.1-P	Field mustard	endoplasmic reticulum	67.27	66.67
CDX79510	Canola	endoplasmic reticulum	67.27	66.67
CDX84702	Canola	endoplasmic reticulum	67.27	66.67
CDY19450	Canola	cytosol, extracellular	67.27	66.37
Bra021804.1-P	Field mustard	cytosol	66.36	66.36
CDY06150	Canola	cytosol	66.36	66.36
CDY59643	Canola	extracellular	22.27	66.22
CDY10053	Canola	endoplasmic reticulum	65.91	65.91
CDY48531	Canola	cytosol	65.0	65.0
Zm00001d013055_P002	Maize	extracellular, plasma membrane	66.36	61.86
CDX79466	Canola	endoplasmic reticulum	49.09	61.36
CDY37751	Canola	endoplasmic reticulum, extracellular, plasma membrane	60.91	61.19
Bra021828.1-P	Field mustard	endoplasmic reticulum, extracellular	60.91	61.19
Zm00001d019091_P002	Maize	vacuole	70.91	59.77
CDX79465	Canola	extracellular	22.73	58.14
CDY19156	Canola	cytosol	37.73	57.64
CDY59642	Canola	endoplasmic reticulum	46.36	57.3
CDY23768	Canola	endoplasmic reticulum, extracellular, plasma membrane	42.73	56.29
CDY23767	Canola	extracellular	25.0	51.4
GSMUA_Achr8P32930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.36	47.48
GSMUA_Achr9P30970_001	Banana	cytosol	49.09	47.37
AT3G24890.2	Thale cress	cytosol	21.36	37.9
GSMUA_Achr9P09180_001	Banana	endoplasmic reticulum, plasma membrane	31.36	31.36
GSMUA_Achr6P35140_001	Banana	plasma membrane	30.91	30.91
GSMUA_Achr11P...	Banana	endoplasmic reticulum	30.45	30.73
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	29.55	29.82
TraesCS3B01G193500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.0	29.46
PGSC0003DMT400043452	Potato	cytosol	43.18	25.75
Solyc12g098170.1.1	Tomato	cytosol	14.09	10.16

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	ncoils:Coil	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	EnsemblPlantsGene:GSMUA_Achr8G03260_001
EnsemblPlants:GSMUA_Achr8P03260_001	EnsemblPlants:GSMUA_Achr8T03260_001	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
UniProt:M0TM78	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	PFscan:PS50859	PFscan:PS50892
PANTHER:PTHR21136	PANTHER:PTHR21136:SF120	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin
TMHMM:TMhelix	UniParc:UPI0002959DA9	SEG:seg	:	:	:

Description

Putative vesicle-associated membrane protein 726 [Source:GMGC_GENE;Acc:GSMUA_Achr8G03260_001]

Coordinates

chr8:+:2281483..2283508

Molecular Weight (calculated)

25065.7 Da

IEP (calculated)

8.567

GRAVY (calculated)

-0.028

Length

220 amino acids

Sequence
(BLAST)

001: MGQKLLIYSF VARRTMILAE YAEFKGNFTR IAAQCLENLS GRNNKFSFNC DGRTFNYLVE DGYTFCVVAV ESVDREIPIF FLERVKEEFN KRYGGNAATA
101: AAKSLSREFG SKLKEHMQYC ADHPEEISKM AKLQAQVSEL KSAMIEKIEK VLDNKENVDV LVEKAKNLYS QAQDFRLQGT TVRRNPWLQD MKIMLIVIVL
201: GIIIALILII VLTICLGNKC

Best Arabidopsis Sequence Match ( AT1G04750.1 )
(BLAST)

001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE DGFTYCVVAV DSAGRQIPMS FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC

Arabidopsis Description

VAMP721Putative vesicle-associated membrane protein, synaptobrevin 7B [Source:UniProtKB/TrEMBL;Acc:Q681L9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.