CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19156	Canola	cytosol	70.79	87.5
CDX79466	Canola	endoplasmic reticulum	85.39	86.36
CDY48527	Canola	cytosol	29.78	73.61
CDY12188	Canola	cytosol	88.76	71.82
CDY23768	Canola	endoplasmic reticulum, extracellular, plasma membrane	66.85	71.26
Bra022893.1-P	Field mustard	cytosol	84.83	68.64
CDX84731	Canola	cytosol	84.83	68.64
AT1G04760.2	Thale cress	cytosol	80.9	65.45
CDY48531	Canola	cytosol	80.9	65.45
CDY19154	Canola	cytosol	80.9	65.45
Os07t0194000-01	Rice	plasma membrane	78.65	63.64
CDX86608	Canola	endoplasmic reticulum	78.09	63.47
CDY18254	Canola	endoplasmic reticulum	78.09	63.18
CDX89793	Canola	endoplasmic reticulum	78.09	63.18
GSMUA_Achr4P22260_001	Banana	cytosol, extracellular	77.53	63.01
VIT_05s0136g00290.t01	Wine grape	extracellular	77.53	62.73
CDY15521	Canola	endoplasmic reticulum	76.97	62.56
Zm00001d007767_P001	Maize	extracellular	77.53	62.16
EER96027	Sorghum	extracellular	77.53	62.16
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	76.4	62.1
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	76.4	61.82
CDX84702	Canola	endoplasmic reticulum	76.97	61.71
GSMUA_Achr9P25440_001	Banana	cytosol, vacuole	75.84	61.64
GSMUA_Achr2P17740_001	Banana	cytosol	75.84	61.64
CDY17139	Canola	cytosol, extracellular	76.97	61.44
CDY06150	Canola	cytosol	75.84	61.36
CDY10053	Canola	endoplasmic reticulum	75.84	61.36
Os03t0803000-01	Rice	plasma membrane	75.84	61.36
CDX79510	Canola	endoplasmic reticulum	76.4	61.26
CDY19450	Canola	cytosol, extracellular	76.4	60.99
GSMUA_Achr9P11030_001	Banana	cytosol	74.72	60.73
GSMUA_Achr7P01760_001	Banana	plasma membrane	74.72	60.73
TraesCS5B01G457700.1	Wheat	vacuole	74.16	59.46
TraesCS5D01G459900.1	Wheat	vacuole	74.16	59.46
HORVU5Hr1G107510.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	74.16	59.19
TraesCS5A01G449900.1	Wheat	unclear	74.16	59.19
CDY37751	Canola	endoplasmic reticulum, extracellular, plasma membrane	68.54	55.71
Zm00001d019091_P002	Maize	vacuole	75.84	51.72
AT2G32670.1	Thale cress	endoplasmic reticulum, golgi	82.02	51.23
CDY22757	Canola	cytosol	56.74	50.0
Zm00001d013055_P002	Maize	extracellular, plasma membrane	66.29	50.0
CDY22900	Canola	cytosol, plasma membrane, plastid	61.8	49.55
CDY44179	Canola	cytosol	61.8	49.55
GSMUA_Achr8P03260_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	57.3	46.36
CDX67594	Canola	cytosol	52.81	39.0
CDY07551	Canola	cytosol	52.25	38.75
CDX76153	Canola	cytosol	52.25	38.43
CDX78228	Canola	cytosol, plasma membrane	51.12	37.92
CDX73490	Canola	plasma membrane	50.56	37.34
CDY13199	Canola	plasma membrane	41.57	37.19
CDX69781	Canola	plasma membrane	37.64	30.32
CDY61387	Canola	endoplasmic reticulum, plasma membrane	36.52	29.68
CDX97084	Canola	plasma membrane	36.52	29.41
CDX75224	Canola	endoplasmic reticulum, plasma membrane	35.39	28.64
CDX68821	Canola	endoplasmic reticulum, plasma membrane	34.83	28.18
CDX70999	Canola	endoplasmic reticulum	33.15	26.7
PGSC0003DMT400043452	Potato	cytosol	54.49	26.29
CDX88799	Canola	plasma membrane	32.58	26.24
CDY09133	Canola	endoplasmic reticulum	31.46	25.34
TraesCS3B01G193500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.67	24.11
CDY23767	Canola	extracellular	7.87	13.08
CDX79465	Canola	extracellular	3.93	8.14
CDY59643	Canola	extracellular	3.37	8.11
Solyc12g098170.1.1	Tomato	cytosol	10.67	6.23

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	GO:A0A078J222	UniProt:A0A078J222
EnsemblPlants:CDY59642	ProteinID:CDY59642	ProteinID:CDY59642.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	EnsemblPlantsGene:GSBRNA2T00027516001	InterPro:IPR001388	InterPro:IPR010908
InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417
PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF92	SUPFAM:SSF58038	SUPFAM:SSF64356
InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI0004EF24F7	SEG:seg	:	:

Description

BnaAnng16140DBnaAnng16140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J222]

Coordinates

chrLK033791:-:33393..34472

Molecular Weight (calculated)

20382.2 Da

IEP (calculated)

9.884

GRAVY (calculated)

-0.074

Length

178 amino acids

Sequence
(BLAST)

001: MLRFLANELF EINFSGSVFF FAYCVVAVES AGRQITMAFL ERVKEDFNKR YGGGKATTAK PNSLNKEFGS KLKGHMQYCV DHPEEINKLS KVKAQVTEVK
101: GVMMENIEKV LDRGEKIELL VDKTENLRSQ AQDFRTQGTK IRRKMWWENM KIKLIVLGII IALILIIILS VCHGFKCT

Best Arabidopsis Sequence Match ( AT1G04750.1 )
(BLAST)

001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE DGFTYCVVAV DSAGRQIPMS FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC

Arabidopsis Description

VAMP721Putative vesicle-associated membrane protein, synaptobrevin 7B [Source:UniProtKB/TrEMBL;Acc:Q681L9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.