Factsheet for GSMUA_Achr9P30970_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g01430.t01	Wine grape	cytosol	74.12	76.47
KRH12042	Soybean	cytosol	73.25	75.57
Solyc01g066940.2.1	Tomato	cytosol	72.81	75.11
KRH50864	Soybean	cytosol	72.81	75.11
KRH02246	Soybean	cytosol	72.81	75.11
KRH37118	Soybean	cytosol	72.37	73.99
Bra033511.1-P	Field mustard	cytosol	70.61	72.52
CDY22900	Canola	cytosol, plasma membrane, plastid	70.18	72.07
CDY44179	Canola	cytosol	70.18	72.07
AT4G15780.1	Thale cress	cytosol	57.46	71.2
Os07t0249200-01	Rice	cytosol	74.12	68.15
KXG34786	Sorghum	cytosol	72.37	66.27
Zm00001d005468_P001	Maize	cytosol	71.05	64.03
Zm00001d019298_P002	Maize	cytosol	69.74	62.85
GSMUA_Achr9P25440_001	Banana	cytosol, vacuole	60.09	62.56
GSMUA_Achr4P22260_001	Banana	cytosol, extracellular	60.09	62.56
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	59.21	61.64
GSMUA_Achr9P11030_001	Banana	cytosol	58.33	60.73
GSMUA_Achr7P01760_001	Banana	plasma membrane	58.33	60.73
GSMUA_Achr2P17740_001	Banana	cytosol	57.89	60.27
Bra038066.1-P	Field mustard	cytosol	52.63	59.41
CDY22757	Canola	cytosol	52.63	59.41
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	55.7	57.73
PGSC0003DMT400029447	Potato	cytosol	72.81	56.08
TraesCS5A01G003100.1	Wheat	cytosol	54.82	53.88
TraesCS5D01G003800.1	Wheat	cytosol	54.39	53.68
GSMUA_Achr8P03260_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	47.37	49.09
GSMUA_Achr8P32930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.93	44.96
GSMUA_Achr9P09180_001	Banana	endoplasmic reticulum, plasma membrane	32.02	33.18
GSMUA_Achr6P35140_001	Banana	plasma membrane	31.58	32.73
GSMUA_Achr11P...	Banana	endoplasmic reticulum	30.26	31.65
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	28.95	30.28

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	ncoils:Coil	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	EnsemblPlantsGene:GSMUA_Achr9G30970_001
EnsemblPlants:GSMUA_Achr9P30970_001	EnsemblPlants:GSMUA_Achr9T30970_001	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
UniProt:M0U504	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	PFscan:PS50859	PFscan:PS50892
PANTHER:PTHR21136	PANTHER:PTHR21136:SF72	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin
TMHMM:TMhelix	UniParc:UPI000294A3BC	SEG:seg	:	:	:

Description

Vesicle-associated membrane protein 724 [Source:GMGC_GENE;Acc:GSMUA_Achr9G30970_001]

Coordinates

chr9:-:34033387..34037214

Molecular Weight (calculated)

25655.3 Da

IEP (calculated)

9.464

GRAVY (calculated)

-0.096

Length

228 amino acids

Sequence
(BLAST)

001: MAEEGKEGWF IYGFVARGTV VLAEYTEYTG NFPAIAAQCL QKLPSSNKLS TYACDAHTFI FLVHNGYAYC VVTKDSVVKN VSIAFLERLK ADFTKRYGGG
101: KADTATAKSL NKEFGPVIKG HMQYIIDHAE EVEKLLKVKV QVSEVKNIML ENIDKTLERG EKLTDLEAKA SDLRNEAQGF KKQGTRIRKK MWLQNMKIKL
201: VVLGILLFLV VIIWVSVCRG FDCTKQNS

Best Arabidopsis Sequence Match ( AT1G04760.1 )
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT

Arabidopsis Description

VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.