Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22900 | Canola | cytosol, plasma membrane, plastid | 95.65 | 79.28 |
| Bra033511.1-P | Field mustard | cytosol | 95.11 | 78.83 |
| CDY44179 | Canola | cytosol | 94.57 | 78.38 |
| KRH50864 | Soybean | cytosol | 89.13 | 74.21 |
| KRH12042 | Soybean | cytosol | 88.59 | 73.76 |
| KRH02246 | Soybean | cytosol | 88.04 | 73.3 |
| KRH37118 | Soybean | cytosol | 86.96 | 71.75 |
| Solyc01g066940.2.1 | Tomato | cytosol | 83.7 | 69.68 |
| VIT_05s0020g01430.t01 | Wine grape | cytosol | 82.07 | 68.33 |
| CDY22757 | Canola | cytosol | 64.67 | 58.91 |
| Bra038066.1-P | Field mustard | cytosol | 64.67 | 58.91 |
| AT1G04760.2 | Thale cress | cytosol | 70.11 | 58.64 |
| AT1G04750.1 | Thale cress | endoplasmic reticulum, golgi | 69.57 | 58.45 |
| GSMUA_Achr9P30970_001 | Banana | cytosol | 71.2 | 57.46 |
| AT2G33120.2 | Thale cress | golgi | 69.57 | 55.9 |
| PGSC0003DMT400029447 | Potato | cytosol | 83.7 | 52.03 |
| Os07t0249200-01 | Rice | cytosol | 67.39 | 50.0 |
| AT2G33110.1 | Thale cress | extracellular, golgi | 58.7 | 49.77 |
| KXG34786 | Sorghum | cytosol | 65.76 | 48.59 |
| Zm00001d005468_P001 | Maize | cytosol | 65.76 | 47.83 |
| Zm00001d019298_P002 | Maize | cytosol | 63.04 | 45.85 |
| TraesCS5D01G003800.1 | Wheat | cytosol | 56.52 | 45.02 |
| TraesCS5A01G003100.1 | Wheat | cytosol | 56.52 | 44.83 |
| AT2G32670.1 | Thale cress | endoplasmic reticulum, golgi | 69.02 | 44.56 |
| AT3G54300.3 | Thale cress | cytosol | 53.8 | 41.25 |
| AT5G11150.2 | Thale cress | golgi, plasma membrane | 34.78 | 28.32 |
| AT3G24890.2 | Thale cress | cytosol | 19.02 | 28.23 |
| AT4G32150.1 | Thale cress | golgi, plasma membrane | 33.15 | 27.85 |
| AT5G22360.1 | Thale cress | plasma membrane | 32.07 | 26.7 |
| AT2G25340.1 | Thale cress | endoplasmic reticulum, plasma membrane | 31.52 | 26.48 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:13.4.2.3.4 | MapMan:22.7.5.1 | Gene3D:3.30.450.50 | EntrezGene:827258 | UniProt:A0A2H1ZEN2 |
| ProteinID:AEE83651.2 | ArrayExpress:AT4G15780 | EnsemblPlantsGene:AT4G15780 | RefSeq:AT4G15780 | TAIR:AT4G15780 | RefSeq:AT4G15780-TAIR-G |
| EnsemblPlants:AT4G15780.1 | TAIR:AT4G15780.1 | Symbol:ATVAMP724 | ncoils:Coil | GO:GO:0000149 | GO:GO:0003674 |
| GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0006906 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016192 | GO:GO:0031201 | GO:GO:0031901 | InterPro:IPR001388 | InterPro:IPR010908 | InterPro:Longin-like_dom_sf |
| InterPro:Longin_dom | RefSeq:NP_193313.6 | PFAM:PF00957 | PFAM:PF13774 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00219 | ScanProsite:PS00417 |
| PFscan:PS50859 | PFscan:PS50892 | PANTHER:PTHR21136 | PANTHER:PTHR21136:SF72 | SMART:SM01270 | SUPFAM:SSF58038 |
| SUPFAM:SSF64356 | InterPro:Synaptobrevin | UniParc:UPI000848543C | : | : | : |
Description
ATVAMP724vesicle-associated membrane protein 724 [Source:TAIR;Acc:AT4G15780]
Coordinates
chr4:-:8979819..8981829
Molecular Weight (calculated)
20808.9 Da
IEP (calculated)
9.031
GRAVY (calculated)
-0.429
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQESFIYSF VARGTMILAE YTEFTGNFPS IAAQCLQKLP SSSNSKFTYN CDHHTFNFLV EDGYAYCVVA KDSLSKQISI AFLERVKADF KKRYGGGKAS
101: TAIAKSLNKE FGPVMKEHMN YIVDHAEEIE KLIKVKAQVS EVKSIMLENI DKAIDRGENL TVLTDKTENL RSQAREYKKT KGHR
101: TAIAKSLNKE FGPVMKEHMN YIVDHAEEIE KLIKVKAQVS EVKSIMLENI DKAIDRGENL TVLTDKTENL RSQAREYKKT KGHR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.