CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50864	Soybean	cytosol	99.09	99.09
KRH12042	Soybean	cytosol	94.12	94.12
KRH37118	Soybean	cytosol	91.86	91.03
Bra033511.1-P	Field mustard	cytosol	89.14	88.74
CDY22900	Canola	cytosol, plasma membrane, plastid	89.14	88.74
CDY44179	Canola	cytosol	89.14	88.74
AT4G15780.1	Thale cress	cytosol	73.3	88.04
VIT_05s0020g01430.t01	Wine grape	cytosol	87.33	87.33
Solyc01g066940.2.1	Tomato	cytosol	86.43	86.43
KRH33448	Soybean	extracellular, golgi	21.27	74.6
GSMUA_Achr9P30970_001	Banana	cytosol	75.11	72.81
Bra038066.1-P	Field mustard	cytosol	65.16	71.29
CDY22757	Canola	cytosol	65.16	71.29
KRG99810	Soybean	endoplasmic reticulum	69.23	69.23
KRH46773	Soybean	endoplasmic reticulum	69.23	69.23
KRH36720	Soybean	endoplasmic reticulum	66.97	66.97
KRH11727	Soybean	cytosol	66.52	66.52
KRG90219	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	65.61	65.61
KRG89410	Soybean	cytosol	66.06	64.89
KRH50475	Soybean	endoplasmic reticulum	65.61	64.44
PGSC0003DMT400029447	Potato	cytosol	85.97	64.19
Os07t0249200-01	Rice	cytosol	71.04	63.31
KXG34786	Sorghum	cytosol	69.68	61.85
Zm00001d005468_P001	Maize	cytosol	69.23	60.47
Zm00001d019298_P002	Maize	cytosol	66.97	58.5
TraesCS5D01G003800.1	Wheat	cytosol	58.37	55.84
TraesCS5A01G003100.1	Wheat	cytosol	58.37	55.6
KRH33450	Soybean	cytosol	40.27	50.57
KRH36005	Soybean	endoplasmic reticulum	53.85	50.0
KRG99807	Soybean	cytosol	49.32	49.32
KRG90750	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	47.06	41.11
KRH57708	Soybean	plastid	21.72	40.68
KRH73537	Soybean	endoplasmic reticulum	34.39	34.7
KRH14588	Soybean	endoplasmic reticulum	33.94	34.25
KRH30399	Soybean	endoplasmic reticulum	33.48	33.64
KRH25265	Soybean	plasma membrane	33.48	33.64
KRH20159	Soybean	plastid	29.41	29.02
KRH03646	Soybean	plasma membrane	29.41	28.89

Protein Annotations

Gene3D:1.20.5.110	EntrezGene:100814264	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	EMBL:ACUP02010299
EnsemblPlantsGene:GLYMA_17G025800	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016192	GO:GO:0031201	UniProt:I1MRH6	InterPro:IPR001388	InterPro:IPR010908	ProteinID:KRH02245.1
EnsemblPlants:KRH02246	ProteinID:KRH02246	ProteinID:KRH02246.1	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PFAM:PF00957
PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF72	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix
UniParc:UPI000233E23C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:1901631..1904669

Molecular Weight (calculated)

25081.6 Da

IEP (calculated)

8.685

GRAVY (calculated)

-0.110

Length

221 amino acids

Sequence
(BLAST)

001: MSQESFIYGF VARGTMVLAE YTEFTGNFPA IAAQCLEKLP SSNNKFTYNC DHHTFNFLVE DGYAYCVVAK ESVSKQISIA FLERVKADFK KRYGGGKADT
101: AVAKSLNKEF GPVMKEHMKY IIDHAEEIEK LIKVKAQVSE VKSIMLENID KAIDRGENLT ILADKTETLH SQAQEFKKQG THVRRKMWYQ NMKIKLVVLG
201: ILLLLVLVIW LSVCHGFNCA N

Best Arabidopsis Sequence Match ( AT4G15780.1 )
(BLAST)

001: MGQESFIYSF VARGTMILAE YTEFTGNFPS IAAQCLQKLP SSSNSKFTYN CDHHTFNFLV EDGYAYCVVA KDSLSKQISI AFLERVKADF KKRYGGGKAS
101: TAIAKSLNKE FGPVMKEHMN YIVDHAEEIE KLIKVKAQVS EVKSIMLENI DKAIDRGENL TVLTDKTENL RSQAREYKKT KGHR

Arabidopsis Description

ATVAMP724vesicle-associated membrane protein 724 [Source:TAIR;Acc:AT4G15780]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.