CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33448	Soybean	extracellular, golgi	21.72	76.19
KRG99810	Soybean	endoplasmic reticulum	60.18	60.18
KRH46773	Soybean	endoplasmic reticulum	60.18	60.18
KRH36720	Soybean	endoplasmic reticulum	57.47	57.47
KRH50475	Soybean	endoplasmic reticulum	58.37	57.33
KRG90219	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	57.01	57.01
KRH11727	Soybean	cytosol	57.01	57.01
KRG89410	Soybean	cytosol	57.92	56.89
KRH12042	Soybean	cytosol	51.13	51.13
KRH37118	Soybean	cytosol	51.58	51.12
KRH50864	Soybean	cytosol	50.23	50.23
KRH02246	Soybean	cytosol	49.32	49.32
KRH33450	Soybean	cytosol	33.94	42.61
KRH36005	Soybean	endoplasmic reticulum	45.25	42.02
KRG90750	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	44.8	39.13
KRH57708	Soybean	plastid	20.81	38.98
KRH30399	Soybean	endoplasmic reticulum	27.6	27.73
KRH25265	Soybean	plasma membrane	27.6	27.73
KRH03646	Soybean	plasma membrane	28.05	27.56
KRH14588	Soybean	endoplasmic reticulum	26.7	26.94
KRH73537	Soybean	endoplasmic reticulum	26.7	26.94
KRH20159	Soybean	plastid	26.7	26.34

Protein Annotations

Gene3D:1.20.5.110	EntrezGene:100803251	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	EMBL:ACUP02011311
EnsemblPlantsGene:GLYMA_18G172100	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016192	GO:GO:0031201	InterPro:IPR001388	InterPro:IPR010908	UniProt:K7MSW7	EnsemblPlants:KRG99807
ProteinID:KRG99807	ProteinID:KRG99807.1	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PFAM:PF00957	PFAM:PF13774
PRINTS:PR00219	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF120	SMART:SM01270
SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	UniParc:UPI0002962EAD	:	:

Description

hypothetical protein

Coordinates

chr18:+:40781648..40787005

Molecular Weight (calculated)

24956.7 Da

IEP (calculated)

6.783

GRAVY (calculated)

-0.379

Length

221 amino acids

Sequence
(BLAST)

001: MGQQSLIYSF VARGTMILAE HTDFSGNFAE VALQCLQRLP ASDNKFTYNA DGHTFNYLTY NGFTYCVVAV ESVGRQLAMA YLERIMEDFS KRYGGGKATT
101: ATAKSLNKEF GSKLKEHMQY CVEHPEEVSK LAKVKAQVSE VQQVMRANID QVLDRQVKID VLVGQTEDLR NQGAGRPDKE KDVVSKHEDK VNSTCHRDCH
201: HFNNCLIGHL ELLQLDPFFV I

Best Arabidopsis Sequence Match ( AT1G04750.1 )
(BLAST)

001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE DGFTYCVVAV DSAGRQIPMS FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC

Arabidopsis Description

VAMP721Putative vesicle-associated membrane protein, synaptobrevin 7B [Source:UniProtKB/TrEMBL;Acc:Q681L9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.