CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57708	Soybean	plastid	74.6	39.83
KRG90219	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	95.24	27.15
PGSC0003DMT400076273	Potato	cytosol	84.13	23.98
KRG99810	Soybean	endoplasmic reticulum	84.13	23.98
KRH46773	Soybean	endoplasmic reticulum	84.13	23.98
Solyc09g091610.2.1	Tomato	plastid	82.54	23.53
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	80.95	23.18
KRG89410	Soybean	cytosol	79.37	22.22
KRH36720	Soybean	endoplasmic reticulum	77.78	22.17
KRH50864	Soybean	cytosol	77.78	22.17
KRH12042	Soybean	cytosol	77.78	22.17
KRH11727	Soybean	cytosol	77.78	22.17
KRH37118	Soybean	cytosol	77.78	21.97
KRH50475	Soybean	endoplasmic reticulum	77.78	21.78
KRG99807	Soybean	cytosol	76.19	21.72
Solyc12g098180.1.1	Tomato	cytosol, vacuole	74.6	21.27
KRH02246	Soybean	cytosol	74.6	21.27
Zm00001d027808_P001	Maize	cytosol, mitochondrion	66.67	19.0
KXG40114	Sorghum	cytosol, vacuole	65.08	18.64
Os03t0165800-01	Rice	plasma membrane	63.49	17.94
TraesCS4D01G280300.1	Wheat	cytosol	61.9	17.57
KRH36005	Soybean	endoplasmic reticulum	65.08	17.23
KRG90750	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.49	15.81
TraesCS4B01G281700.1	Wheat	cytosol	61.9	15.35
TraesCS4A01G021800.2	Wheat	cytosol	61.9	15.35
Zm00001d048443_P002	Maize	peroxisome	68.25	13.87
KRH30399	Soybean	endoplasmic reticulum	36.51	10.45
KRH25265	Soybean	plasma membrane	36.51	10.45
KRH73537	Soybean	endoplasmic reticulum	33.33	9.59
KRH14588	Soybean	endoplasmic reticulum	33.33	9.59
KRH03646	Soybean	plasma membrane	31.75	8.89
KRH20159	Soybean	plastid	30.16	8.48
KRH33450	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02006498	EnsemblPlants:KRH33448	EnsemblPlantsGene:GLYMA_10G1235002	Gene3D:3.30.450.50	GO:GO:0006810	GO:GO:0008150
GO:GO:0016192	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PANTHER:PTHR21136	PANTHER:PTHR21136:SF120
PFAM:PF13774	PFscan:PS50859	ProteinID:KRH33448	ProteinID:KRH33448.1	ProteinID:KRH33449.1	SUPFAM:SSF64356
UniParc:UPI0006ED59E3	UniProt:A0A0R0I0P8	MapMan:22.7.5.1	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:32208663..32208947

Molecular Weight (calculated)

7093.4 Da

IEP (calculated)

7.247

GRAVY (calculated)

-0.205

Length

63 amino acids

Sequence
(BLAST)

1: MGQQSLIYSF VARGTMILAE YSEFSGNFKT IASQCLQKLP SSNNRFTYNC DGHTFNYLVE NGV

Best Arabidopsis Sequence Match ( AT1G04760.1 )
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT

Arabidopsis Description

VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.