CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 3
mitochondrion 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33448	Soybean	extracellular, golgi	27.15	95.24
KRH46773	Soybean	endoplasmic reticulum	82.35	82.35
KRG99810	Soybean	endoplasmic reticulum	81.9	81.9
PGSC0003DMT400076273	Potato	cytosol	80.54	80.54
Solyc09g091610.2.1	Tomato	plastid	80.09	80.09
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	79.64	80.0
KRH36720	Soybean	endoplasmic reticulum	79.19	79.19
KRH11727	Soybean	cytosol	78.73	78.73
KRH33450	Soybean	cytosol	61.09	76.7
Solyc12g098180.1.1	Tomato	cytosol, vacuole	76.47	76.47
KRG89410	Soybean	cytosol	77.83	76.44
KRH50475	Soybean	endoplasmic reticulum	76.92	75.56
Zm00001d027808_P001	Maize	cytosol, mitochondrion	73.3	73.3
KXG40114	Sorghum	cytosol, vacuole	72.85	73.18
Os03t0165800-01	Rice	plasma membrane	71.95	71.3
TraesCS4D01G280300.1	Wheat	cytosol	71.04	70.72
KRH12042	Soybean	cytosol	68.33	68.33
KRH37118	Soybean	cytosol	67.42	66.82
KRH50864	Soybean	cytosol	66.52	66.52
KRH02246	Soybean	cytosol	65.61	65.61
TraesCS4B01G281700.1	Wheat	cytosol	71.04	61.81
TraesCS4A01G021800.2	Wheat	cytosol	71.04	61.81
KRG99807	Soybean	cytosol	57.01	57.01
KRH36005	Soybean	endoplasmic reticulum	60.63	56.3
Zm00001d048443_P002	Maize	peroxisome	66.52	47.42
KRG90750	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	52.94	46.25
KRH57708	Soybean	plastid	23.98	44.92
KRH73537	Soybean	endoplasmic reticulum	37.1	37.44
KRH14588	Soybean	endoplasmic reticulum	37.1	37.44
KRH30399	Soybean	endoplasmic reticulum	36.65	36.82
KRH25265	Soybean	plasma membrane	36.2	36.36
KRH03646	Soybean	plasma membrane	33.48	32.89
KRH20159	Soybean	plastid	33.03	32.59

Protein Annotations

Gene3D:1.20.5.110	EntrezGene:100793060	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	EMBL:ACUP02012567
EnsemblPlantsGene:GLYMA_20G076200	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016192	GO:GO:0031201	UniProt:I1NEG8	InterPro:IPR001388	InterPro:IPR010908	EnsemblPlants:KRG90219
ProteinID:KRG90219	ProteinID:KRG90219.1	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PFAM:PF00957	PFAM:PF13774
PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF92
SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI000233DD1F

Description

hypothetical protein

Coordinates

chr20:+:27595639..27599262

Molecular Weight (calculated)

24987.5 Da

IEP (calculated)

9.384

GRAVY (calculated)

-0.202

Length

221 amino acids

Sequence
(BLAST)

001: MGQQSLIYSF VARGTMVLAE YSEFSGNFNT IASQCLQKLP SSNNRFTYNC DGHTFNYLVE NGFTYCVVAI ESAGRQLPIA FLERVKDEFS KKYGGGKAAT
101: ASANSLNREF GPKLKQQMQY CVDHPEEINK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE MLVDKTDNLR SQAQDFRTQG TKVKRKMWVQ NMKMKLIVFG
201: IAVALILIMF MSICRGFSCL H

Best Arabidopsis Sequence Match ( AT1G04760.2 )
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT

Arabidopsis Description

VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.