Factsheet for Solyc09g091610.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076273	Potato	cytosol	97.74	97.74
Solyc09g061620.2.1	Tomato	nucleus, plastid	84.62	85.0
Solyc06g083530.2.1	Tomato	plastid	83.71	84.09
KRH33448	Soybean	extracellular, golgi	23.53	82.54
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	81.9	82.27
Solyc12g098180.1.1	Tomato	cytosol, vacuole	81.45	81.45
KRG90219	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	80.09	80.09
Solyc02g069150.2.1	Tomato	nucleus	78.73	78.38
Zm00001d027808_P001	Maize	cytosol, mitochondrion	75.11	75.11
TraesCS4D01G280300.1	Wheat	cytosol	74.21	73.87
KXG40114	Sorghum	cytosol, vacuole	72.85	73.18
Os03t0165800-01	Rice	plasma membrane	72.85	72.2
Solyc01g066940.2.1	Tomato	cytosol	65.61	65.61
TraesCS4A01G021800.2	Wheat	cytosol	74.21	64.57
TraesCS4B01G281700.1	Wheat	cytosol	74.21	64.57
KRH33450	Soybean	cytosol	51.13	64.2
Solyc11g006780.1.1	Tomato	cytosol, mitochondrion, plasma membrane	59.28	54.58
Zm00001d048443_P002	Maize	peroxisome	65.16	46.45
Solyc06g065950.2.1	Tomato	endoplasmic reticulum, nucleus	36.65	36.82
Solyc06g074250.2.1	Tomato	endoplasmic reticulum, plasma membrane	38.91	32.95
Solyc12g098170.1.1	Tomato	cytosol	15.84	11.48

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	ncoils:Coil	GO:GO:0000149
GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0006906	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0031201
InterPro:IPR001388	InterPro:IPR010908	UniProt:K4CWI7	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PFAM:PF00957
PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF92	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	EnsemblPlantsGene:Solyc09g091610.2	EnsemblPlants:Solyc09g091610.2.1
InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI000276B5AC	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:-:70849099..70851773

Molecular Weight (calculated)

24904.5 Da

IEP (calculated)

9.530

GRAVY (calculated)

-0.168

Length

221 amino acids

Sequence
(BLAST)

001: MGQQTLIYSF VARGTVILAE YTEFTGNFNS IASQCLQKLP ASNNRFTYNC DGHTFNFLAE SGFTYCVVAT ESAGRQLPIA FLERIKDDFS KKYGGGKATT
101: ATPKSLSKEF GPKMKEQMKY CVDNPEEINK LAKVKAQVSE VKGVMMQNIE KVLDRGEKIE LLVDKTENLR SQAQDFRQQG TKIRRKLWYE NMKIKLIVLG
201: IIIALILIII LSVCPGFKCM S

Best Arabidopsis Sequence Match ( AT1G04760.2 )
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT

Arabidopsis Description

VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.