Subcellular Localization
min:
: max
Winner_takes_all: vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d027808_P001 | Maize | cytosol, mitochondrion | 93.18 | 92.76 |
Os03t0165800-01 | Rice | plasma membrane | 88.64 | 87.44 |
TraesCS4D01G280300.1 | Wheat | cytosol | 86.36 | 85.59 |
TraesCS4B01G281700.1 | Wheat | cytosol | 86.36 | 74.8 |
TraesCS4A01G021800.2 | Wheat | cytosol | 86.36 | 74.8 |
PGSC0003DMT400076273 | Potato | cytosol | 73.64 | 73.3 |
GSMUA_Achr6P04490_001 | Banana | cytosol, extracellular | 73.18 | 73.18 |
KRG90219 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 73.18 | 72.85 |
Solyc09g091610.2.1 | Tomato | plastid | 73.18 | 72.85 |
EER96027 | Sorghum | extracellular | 73.18 | 72.52 |
OQU90815 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 70.45 | 70.45 |
Solyc12g098180.1.1 | Tomato | cytosol, vacuole | 69.09 | 68.78 |
KRH33448 | Soybean | extracellular, golgi | 18.64 | 65.08 |
KRH33450 | Soybean | cytosol | 49.55 | 61.93 |
Zm00001d048443_P002 | Maize | peroxisome | 78.18 | 55.48 |
KXG24150 | Sorghum | cytosol | 57.27 | 55.02 |
KXG25383 | Sorghum | plastid | 56.82 | 51.87 |
KXG34786 | Sorghum | cytosol | 53.64 | 47.39 |
EES09956 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 17.27 | 45.78 |
EES13179 | Sorghum | endoplasmic reticulum, plasma membrane | 35.45 | 35.14 |
EES05972 | Sorghum | cytosol | 36.36 | 35.09 |
OQU75937 | Sorghum | plasma membrane | 35.0 | 34.84 |
Protein Annotations
Gene3D:1.20.5.110 | MapMan:13.4.2.3.4 | MapMan:22.7.5.1 | Gene3D:3.30.450.50 | UniProt:A0A1B6QQB8 | ncoils:Coil |
GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 |
InterPro:IPR001388 | InterPro:IPR010908 | EnsemblPlants:KXG40114 | ProteinID:KXG40114 | ProteinID:KXG40114.1 | InterPro:Longin-like_dom_sf |
InterPro:Longin_dom | PFAM:PF00957 | PFAM:PF13774 | PRINTS:PR00219 | ScanProsite:PS00417 | PFscan:PS50859 |
PFscan:PS50892 | PANTHER:PTHR21136 | PANTHER:PTHR21136:SF109 | SMART:SM01270 | EnsemblPlantsGene:SORBI_3001G493600 | SUPFAM:SSF58038 |
SUPFAM:SSF64356 | InterPro:Synaptobrevin | TMHMM:TMhelix | UniParc:UPI00081AE879 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:76260059..76262323
Molecular Weight (calculated)
25028.5 Da
IEP (calculated)
9.359
GRAVY (calculated)
-0.345
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKQSTLVYS FVARGTVVLA DHAEVSGNFA SVAAQCLQKL PTNNNRFNYN CDGHTFNYHI HDGFTYCVVA TESAGRQLPI GFIERVKEDF FKKYGGGKGK
101: TANANGLKRE YGPKLKEHMR YCDQHPEEID KLAKVKAQVT EVKGVMMQNI EKVLDRGEKI ELLVDKTEDL RSQAQDFRKQ GTKIRQKMWW ENMKMKLIVF
201: GIVVALILLI VLTICKDFNC
101: TANANGLKRE YGPKLKEHMR YCDQHPEEID KLAKVKAQVT EVKGVMMQNI EKVLDRGEKI ELLVDKTEDL RSQAQDFRKQ GTKIRQKMWW ENMKMKLIVF
201: GIVVALILLI VLTICKDFNC
001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT
Arabidopsis Description
VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.