Factsheet for Zm00001d048443_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
peroxisome 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	peroxisome
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027808_P001	Maize	cytosol, mitochondrion	57.1	80.09
KXG40114	Sorghum	cytosol, vacuole	55.48	78.18
Os03t0165800-01	Rice	plasma membrane	54.84	76.23
TraesCS4D01G280300.1	Wheat	cytosol	53.23	74.32
KRH33448	Soybean	extracellular, golgi	13.87	68.25
KRG90219	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	47.42	66.52
TraesCS4A01G021800.2	Wheat	cytosol	54.19	66.14
TraesCS4B01G281700.1	Wheat	cytosol	54.19	66.14
PGSC0003DMT400076273	Potato	cytosol	46.77	65.61
Zm00001d007767_P001	Maize	extracellular	46.77	65.32
Solyc09g091610.2.1	Tomato	plastid	46.45	65.16
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	46.13	65.0
Solyc12g098180.1.1	Tomato	cytosol, vacuole	45.81	64.25
Zm00001d053132_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	24.52	56.72
Zm00001d019091_P002	Maize	vacuole	47.42	56.32
Zm00001d013055_P002	Maize	extracellular, plasma membrane	41.94	55.08
KRH33450	Soybean	cytosol	30.32	53.41
Zm00001d031942_P003	Maize	plastid	36.77	47.3
Zm00001d034505_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.29	44.91
Zm00001d005468_P001	Maize	cytosol	34.84	42.69
Zm00001d019298_P002	Maize	cytosol	33.55	41.11
Zm00001d052756_P001	Maize	endoplasmic reticulum	22.58	36.27
Zm00001d018408_P001	Maize	cytosol	21.94	30.09
Zm00001d037483_P002	Maize	plasma membrane	21.61	26.38

Protein Annotations

Gene3D:1.20.5.110	EntrezGene:103639584	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	UniProt:A0A1D6PKL1
ProteinID:AQL09782.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PFAM:PF00957
PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF109	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix
UniParc:UPI000843F0E5	EnsemblPlantsGene:Zm00001d048443	EnsemblPlants:Zm00001d048443_P002	EnsemblPlants:Zm00001d048443_T002	:	:

Description

Putative vesicle-associated membrane protein family protein

Coordinates

chr9:+:156572546..156574992

Molecular Weight (calculated)

34891.2 Da

IEP (calculated)

9.693

GRAVY (calculated)

-0.398

Length

310 amino acids

Sequence
(BLAST)

001: MGQQRTLVYS FVARGTIVLA DHAEVSGNFA SVAAQCLQKL PANNNRFNYN CDGHTFNYHI YDGFTYCVVA TESAGRQLPV GFIERVKEDF SKKYSGGKAK
101: NASANGLKRE YGPKLKEHMR YCDQHPEEID KLAKVKAQVT EVKGVMMQNI EKVLDRGEKI ELLVDKTEDL RSQVPHIYDL MHVQSIGSID LTITKLTALV
201: SPVGTRFQAT GNKDTTEDVV GKHEDEAHRF RHRGCADPPH CLDSLQGLEL LIRSRHTGKK RRTWKREGKK NIEGALLVSH RTAKIHLVFV MLTLITLLFL
301: VMSRSLGSKL

Best Arabidopsis Sequence Match ( AT1G04750.1 )
(BLAST)

001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE DGFTYCVVAV DSAGRQIPMS FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC

Arabidopsis Description

VAMP721Putative vesicle-associated membrane protein, synaptobrevin 7B [Source:UniProtKB/TrEMBL;Acc:Q681L9]
SUBAcon: [golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.