Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48527 | Canola | cytosol | 26.87 | 50.0 |
| Zm00001d007767_P001 | Maize | extracellular | 70.9 | 42.79 |
| Zm00001d019091_P002 | Maize | vacuole | 70.9 | 36.4 |
| Zm00001d013055_P002 | Maize | extracellular, plasma membrane | 61.94 | 35.17 |
| Zm00001d034505_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 73.88 | 34.74 |
| Zm00001d027808_P001 | Maize | cytosol, mitochondrion | 55.22 | 33.48 |
| Zm00001d031942_P003 | Maize | plastid | 47.01 | 26.14 |
| Zm00001d048443_P002 | Maize | peroxisome | 56.72 | 24.52 |
| Zm00001d005468_P001 | Maize | cytosol | 41.04 | 21.74 |
| Zm00001d019298_P002 | Maize | cytosol | 39.55 | 20.95 |
| Zm00001d052756_P001 | Maize | endoplasmic reticulum | 21.64 | 15.03 |
| Zm00001d018408_P001 | Maize | cytosol | 22.39 | 13.27 |
| Zm00001d037483_P002 | Maize | plasma membrane | 23.13 | 12.2 |
Protein Annotations
| EnsemblPlants:Zm00001d053132_P001 | EnsemblPlants:Zm00001d053132_T001 | EnsemblPlantsGene:Zm00001d053132 | InterPro:IPR010908 | InterPro:Longin_dom | PANTHER:PTHR21136 |
| PANTHER:PTHR21136:SF120 | PFAM:PF13774 | ProteinID:AQK58809.1 | SUPFAM:SSF58038 | UniParc:UPI00084246EF | UniProt:A0A1D6QMB7 |
| MapMan:22.7.5.1 | : | : | : | : | : |
Description
Putative vesicle-associated membrane protein family protein
Coordinates
chr4:-:215284156..215285377
Molecular Weight (calculated)
15450.9 Da
IEP (calculated)
7.369
GRAVY (calculated)
-0.059
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLPASNNKF TYNCDGHTFN YLVEDGFRCI RYVLIFGHLC VDLLELAVTR YTALLCFAAY CIVAVESVGQ QIPIAFMDRV KEDFTKRLKL KEHMQYCVDH
101: PEEVSKLAKV KAQVLDRGEK IEVLVDKTEN LRSQ
101: PEEVSKLAKV KAQVLDRGEK IEVLVDKTEN LRSQ
001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE DGFTYCVVAV DSAGRQIPMS FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC
Arabidopsis Description
VAMP721Putative vesicle-associated membrane protein, synaptobrevin 7B [Source:UniProtKB/TrEMBL;Acc:Q681L9]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.