Factsheet for Zm00001d019298_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34786	Sorghum	cytosol	91.3	92.77
Zm00001d005468_P001	Maize	cytosol	89.72	89.72
Os07t0249200-01	Rice	cytosol	83.79	85.48
GSMUA_Achr9P30970_001	Banana	cytosol	62.85	69.74
VIT_05s0020g01430.t01	Wine grape	cytosol	60.08	68.78
KRH12042	Soybean	cytosol	58.89	67.42
KRH50864	Soybean	cytosol	58.89	67.42
KRH02246	Soybean	cytosol	58.5	66.97
KRH37118	Soybean	cytosol	58.1	65.92
Solyc01g066940.2.1	Tomato	cytosol	56.92	65.16
Bra033511.1-P	Field mustard	cytosol	56.52	64.41
CDY44179	Canola	cytosol	56.52	64.41
CDY22900	Canola	cytosol, plasma membrane, plastid	56.13	63.96
AT4G15780.1	Thale cress	cytosol	45.85	63.04
Zm00001d007767_P001	Maize	extracellular	52.17	59.46
Zm00001d027808_P001	Maize	cytosol, mitochondrion	45.85	52.49
CDY22757	Canola	cytosol	41.5	51.98
Bra038066.1-P	Field mustard	cytosol	41.5	51.98
TraesCS5D01G003800.1	Wheat	cytosol	47.04	51.52
TraesCS5A01G003100.1	Wheat	cytosol	47.04	51.29
Zm00001d013055_P002	Maize	extracellular, plasma membrane	46.64	50.0
Zm00001d019091_P002	Maize	vacuole	51.38	49.81
PGSC0003DMT400029447	Potato	cytosol	56.13	47.97
Zm00001d031942_P003	Maize	plastid	41.5	43.57
Zm00001d053132_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	20.95	39.55
Zm00001d034505_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.08	38.25
Zm00001d052756_P001	Maize	endoplasmic reticulum	27.27	35.75
Zm00001d048443_P002	Maize	peroxisome	41.11	33.55
Zm00001d018408_P001	Maize	cytosol	28.06	31.42
Zm00001d037483_P002	Maize	plasma membrane	31.23	31.1

Protein Annotations

Gene3D:1.20.5.110	EntrezGene:100283894	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	UniProt:A0A1D6HWP5
ncoils:Coil	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	ProteinID:ONM52645.1
ProteinID:ONM52646.1	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	PFscan:PS50859	PFscan:PS50892
PANTHER:PTHR21136	PANTHER:PTHR21136:SF72	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin
TMHMM:TMhelix	UniParc:UPI0002218BBC	EnsemblPlantsGene:Zm00001d019298	EnsemblPlants:Zm00001d019298_P002	EnsemblPlants:Zm00001d019298_T002	SEG:seg

Description

Vesicle-associated membrane protein 724

Coordinates

chr7:+:26614886..26618146

Molecular Weight (calculated)

28158.2 Da

IEP (calculated)

8.949

GRAVY (calculated)

-0.210

Length

253 amino acids

Sequence
(BLAST)

001: MVSPTPGGKD AREGGGKAEW MIYAFVARGT AVLAEYTEFT GNFPAIAAQC LQRLPAGSSS AGTGPDGRGD APARFSYACD RHTFNFLLYR GYAYCVVAEE
101: SVPKNVSVAF LERLKDDFMK RYGGGKADTA LAKCLNKEYG QVIKQHIQYV LDHSEELDKM LKVQAQVSEV KNIMLDSIEK TLGRGEKLSE LQDKTSELHI
201: QAQQFKKQGV KIRRKTWLQN MKIKLVILGI LLLLVIIVWV SICQGFDCTK HET

Best Arabidopsis Sequence Match ( AT1G04760.1 )
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT

Arabidopsis Description

VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.