Factsheet for Os07t0249200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34786	Sorghum	cytosol	89.52	89.16
Zm00001d005468_P001	Maize	cytosol	87.9	86.17
Zm00001d019298_P002	Maize	cytosol	85.48	83.79
GSMUA_Achr9P30970_001	Banana	cytosol	68.15	74.12
VIT_05s0020g01430.t01	Wine grape	cytosol	64.52	72.4
KRH50864	Soybean	cytosol	63.71	71.49
KRH02246	Soybean	cytosol	63.31	71.04
KRH12042	Soybean	cytosol	62.5	70.14
Solyc01g066940.2.1	Tomato	cytosol	61.69	69.23
KRH37118	Soybean	cytosol	61.69	68.61
Bra033511.1-P	Field mustard	cytosol	61.29	68.47
CDY44179	Canola	cytosol	61.29	68.47
CDY22900	Canola	cytosol, plasma membrane, plastid	60.89	68.02
AT4G15780.1	Thale cress	cytosol	50.0	67.39
Os07t0194000-01	Rice	plasma membrane	56.45	63.64
Os03t0803000-01	Rice	plasma membrane	54.44	61.36
CDY22757	Canola	cytosol	46.77	57.43
Bra038066.1-P	Field mustard	cytosol	46.77	57.43
Os12t0639800-00	Rice	plasma membrane	49.19	55.71
Os03t0165800-01	Rice	plasma membrane	49.6	55.16
PGSC0003DMT400029447	Potato	cytosol	60.89	51.01
Os08t0558600-01	Rice	extracellular	44.35	45.64
Os06t0174400-01	Rice	plasma membrane	31.05	34.84
Os02t0803600-01	Rice	plasma membrane	29.84	32.74
Os10t0154000-01	Rice	plasma membrane	29.84	32.74

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	EntrezGene:4342836	EMBL:AK059902
EMBL:AK102619	ProteinID:BAC20811.1	ProteinID:BAD30660.1	ProteinID:BAF21205.1	ProteinID:BAT00830.1	ncoils:Coil
ProteinID:EEE66890.1	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016192	GO:GO:0031201	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
EnsemblPlantsGene:Os07g0249200	EnsemblPlants:Os07t0249200-01	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	PFscan:PS50859
PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF72	UniProt:Q8H3D2	SMART:SM01270	SUPFAM:SSF58038
SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI00000AD833	RefSeq:XP_015645337.1	SEG:seg

Description

Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein). (Os07t0249200-01);Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein). (Os07t0249200-02)

Coordinates

chr7:+:8287896..8291153

Molecular Weight (calculated)

27074.9 Da

IEP (calculated)

9.606

GRAVY (calculated)

-0.217

Length

248 amino acids

Sequence
(BLAST)

001: MASPPGKKGE GGGDGGGGKA EWLIYAFVAR GTAVLAEYTE FTGNFPALAA QCLQRLPASG GGGSGGGAPA RFSYACDGHT FNFLLHRGYA YCVVAKESVP
101: KNVSVAFLER LKDDFMKRYG GGKADTALAK SLNKEYGPVI KQHMQYVLDH SEEIEKTLKV QAQVSEVKNI MLENIEKTLG RGEKLSELQD KTSDLQSQAQ
201: EFKKKGVKIR RKTWLQNMKI KLVVLGILLL LVIIVWVSVC QGFDCTKH

Best Arabidopsis Sequence Match ( AT4G15780.1 )
(BLAST)

001: MGQESFIYSF VARGTMILAE YTEFTGNFPS IAAQCLQKLP SSSNSKFTYN CDHHTFNFLV EDGYAYCVVA KDSLSKQISI AFLERVKADF KKRYGGGKAS
101: TAIAKSLNKE FGPVMKEHMN YIVDHAEEIE KLIKVKAQVS EVKSIMLENI DKAIDRGENL TVLTDKTENL RSQAREYKKT KGHR

Arabidopsis Description

ATVAMP724vesicle-associated membrane protein 724 [Source:TAIR;Acc:AT4G15780]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.