Factsheet for Bra038066.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22757	Canola	cytosol	100.0	100.0
Bra033511.1-P	Field mustard	cytosol	77.72	70.72
KRH12042	Soybean	cytosol	72.28	66.06
KRH50864	Soybean	cytosol	71.78	65.61
KRH02246	Soybean	cytosol	71.29	65.16
AT4G15780.1	Thale cress	cytosol	58.91	64.67
KRH37118	Soybean	cytosol	70.79	64.13
Solyc01g066940.2.1	Tomato	cytosol	65.84	60.18
VIT_05s0020g01430.t01	Wine grape	cytosol	65.35	59.73
GSMUA_Achr9P30970_001	Banana	cytosol	59.41	52.63
Bra030588.1-P	Field mustard	endoplasmic reticulum	53.96	49.77
Bra022926.1-P	Field mustard	endoplasmic reticulum	54.46	49.55
Bra015345.1-P	Field mustard	endoplasmic reticulum	53.96	49.55
Bra005568.1-P	Field mustard	cytosol	53.96	49.55
Bra032493.1-P	Field mustard	cytosol	53.96	49.55
Bra005523.1-P	Field mustard	cytosol, extracellular	54.46	49.33
Bra022893.1-P	Field mustard	cytosol	53.47	49.09
Bra021804.1-P	Field mustard	cytosol	52.48	48.18
Os07t0249200-01	Rice	cytosol	57.43	46.77
Bra021828.1-P	Field mustard	endoplasmic reticulum, extracellular	48.51	44.75
PGSC0003DMT400029447	Potato	cytosol	65.35	44.59
KXG34786	Sorghum	cytosol	54.46	44.18
Zm00001d005468_P001	Maize	cytosol	53.96	43.08
Zm00001d019298_P002	Maize	cytosol	51.98	41.5
TraesCS5D01G003800.1	Wheat	cytosol	46.04	40.26
TraesCS5A01G003100.1	Wheat	cytosol	46.04	40.09
Bra003177.1-P	Field mustard	cytosol	40.1	33.61
Bra014823.1-P	Field mustard	golgi	40.1	33.47
Bra007063.1-P	Field mustard	cytosol, plasma membrane	39.6	33.33
Bra008987.1-P	Field mustard	mitochondrion	26.73	24.43
Bra040067.1-P	Field mustard	endoplasmic reticulum, plasma membrane	26.24	24.2
Bra006623.1-P	Field mustard	endoplasmic reticulum, plasma membrane	25.74	23.53
Bra020187.1-P	Field mustard	endoplasmic reticulum	25.25	23.08
Bra011325.1-P	Field mustard	endoplasmic reticulum	23.27	12.88

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	EnsemblPlantsGene:Bra038066	EnsemblPlants:Bra038066.1	EnsemblPlants:Bra038066.1-P
ncoils:Coil	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	UniProt:M4FAF2
PFAM:PF00957	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF72	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI0002545C03
SEG:seg	:	:	:	:	:

Description

AT4G15780 (E=2e-060) ATVAMP724, VAMP724 | ATVAMP724

Coordinates

chrA08:-:6817417..6819915

Molecular Weight (calculated)

23083.4 Da

IEP (calculated)

9.702

GRAVY (calculated)

-0.242

Length

202 amino acids

Sequence
(BLAST)

001: MSFIRCEAEK VGSSGGCKRR RRDQERLTGT VTSGYCTLVF DIMEAYCVVA KDALSKQTWI AFLERVKADF KKRYGGGKAS AAIAKSLNKE FMPVMKEHMK
101: YIVDHAEEIE KLIKVKAQVS EVKSIMLENI DKAIDRGENL TVLSDKTENL RSQAQEYKKQ GTQVRRKLWY QNMKIKLVVL GILLLHVLII WLSICHGFDC
201: TD

Best Arabidopsis Sequence Match ( AT1G04750.1 )
(BLAST)

001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE DGFTYCVVAV DSAGRQIPMS FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC

Arabidopsis Description

VAMP721Putative vesicle-associated membrane protein, synaptobrevin 7B [Source:UniProtKB/TrEMBL;Acc:Q681L9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.