Factsheet for Bra008987.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69781	Canola	plasma membrane	98.19	98.19
CDX97084	Canola	plasma membrane	96.83	96.83
AT5G11150.2	Thale cress	golgi, plasma membrane	88.24	86.28
Bra040067.1-P	Field mustard	endoplasmic reticulum, plasma membrane	83.26	84.02
VIT_04s0008g05650.t01	Wine grape	extracellular	81.45	81.82
KRH73537	Soybean	endoplasmic reticulum	81.0	81.74
KRH14588	Soybean	endoplasmic reticulum	80.54	81.28
PGSC0003DMT400067225	Potato	mitochondrion	78.28	78.64
Solyc06g065950.2.1	Tomato	endoplasmic reticulum, nucleus	77.38	77.73
GSMUA_Achr9P09180_001	Banana	endoplasmic reticulum, plasma membrane	76.02	76.36
GSMUA_Achr6P35140_001	Banana	plasma membrane	75.11	75.45
OQU75937	Sorghum	plasma membrane	70.59	70.59
Os06t0174400-01	Rice	plasma membrane	69.23	69.23
TraesCS7A01G136300.1	Wheat	plasma membrane, plastid	68.33	68.33
TraesCS7B01G037300.1	Wheat	plasma membrane, plastid	68.33	68.33
TraesCS7D01G136300.1	Wheat	endoplasmic reticulum, plasma membrane	67.87	67.87
KRH03646	Soybean	plasma membrane	67.42	66.22
KRH20159	Soybean	plastid	66.97	66.07
EES05972	Sorghum	cytosol	66.06	64.04
Os02t0803600-01	Rice	plasma membrane	65.16	63.72
Zm00001d018408_P001	Maize	cytosol	64.71	63.27
Zm00001d037483_P002	Maize	plasma membrane	70.59	61.42
HORVU7Hr1G028250.1	Barley	peroxisome, plasma membrane	67.42	60.57
TraesCS6A01G371800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	63.8	60.52
TraesCS6D01G355800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	63.35	60.09
TraesCS6B01G409400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	62.9	59.66
Bra020187.1-P	Field mustard	endoplasmic reticulum	53.39	53.39
Bra006623.1-P	Field mustard	endoplasmic reticulum, plasma membrane	52.49	52.49
Bra011325.1-P	Field mustard	endoplasmic reticulum	77.83	47.12
Bra015345.1-P	Field mustard	endoplasmic reticulum	38.46	38.64
Bra030588.1-P	Field mustard	endoplasmic reticulum	38.01	38.36
Bra005568.1-P	Field mustard	cytosol	38.01	38.18
Bra032493.1-P	Field mustard	cytosol	37.56	37.73
Bra005523.1-P	Field mustard	cytosol, extracellular	38.01	37.67
Bra022926.1-P	Field mustard	endoplasmic reticulum	37.56	37.39
Bra022893.1-P	Field mustard	cytosol	37.1	37.27
Bra021828.1-P	Field mustard	endoplasmic reticulum, extracellular	36.2	36.53
Bra021804.1-P	Field mustard	cytosol	36.2	36.36
Bra033511.1-P	Field mustard	cytosol	33.03	32.88
Bra014823.1-P	Field mustard	golgi	35.29	32.23
Bra007063.1-P	Field mustard	cytosol, plasma membrane	34.84	32.08
Bra003177.1-P	Field mustard	cytosol	34.39	31.54
Bra038066.1-P	Field mustard	cytosol	24.43	26.73

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	EnsemblPlantsGene:Bra008987	EnsemblPlants:Bra008987.1	EnsemblPlants:Bra008987.1-P
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192
InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	UniProt:M4CXP0	PFAM:PF00957
PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF104	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix
UniParc:UPI0002544304	SEG:seg	:	:	:	:

Description

AT5G11150 (E=2e-098) ATVAMP713, VAMP713 | ATVAMP713 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 713)

Coordinates

chrA10:+:14736353..14737528

Molecular Weight (calculated)

25057.3 Da

IEP (calculated)

9.735

GRAVY (calculated)

-0.119

Length

221 amino acids

Sequence
(BLAST)

001: MAILYALVAR GSVGLSGFSA TSTKASSIAK QILEKLPGED VDSHVSYSQD RYVFHVKRTD GLTVLCMADE TAGRSVPFAF LEEIHQRFVR TYGRAIHSAQ
101: AYSMNDEFSR VLSQQMEYYS NDPNADRVSR IKGEMTQVRN VMIENIDKVL DRGERLELLV DKTANMQGNT FRFRKQARRF RSVMWWRNVK LTIALILALA
201: VVVYIAMAFV CHGPSLPSCF K

Best Arabidopsis Sequence Match ( AT5G11150.1 )
(BLAST)

001: MAIIFALVAR GTVVLSEFSA TSTNASSISK QILEKLPGND SDSHMSYSQD RYIFHVKRTD GLTVLCMADE TAGRNIPFAF LDDIHQRFVK TYGRAIHSAQ
101: AYSMNDEFSR VLSQQMEFYS NDPNADRMSR IKGEMSQVRN VMIENIDKVL DRGERLELLV DKTENMQGNT FRFRKQARRY RTIMWWRNVK LTIALILVLA
201: LVVYIAMAFV CHGPSLPSCF K

Arabidopsis Description

ATVAMP713vesicle-associated membrane protein 713 [Source:TAIR;Acc:AT5G11150]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.