Factsheet for TraesCS7A01G136300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

mitochondrion 2
peroxisome 1
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G175000.1
TraesCS3D01G180500.1
TraesCS6A01G271000.1
TraesCS6B01G298100.3
TraesCS6D01G244100.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32150.1	TraesCS3A01G175000.1	AT5G46860.1	24556609
AT4G32150.1	TraesCS3D01G180500.1	AT5G46860.1	24556609
AT4G32150.1	TraesCS6A01G271000.1	AT5G46860.1	24556609
AT4G32150.1	TraesCS6B01G298100.3	AT5G46860.1	24556609
AT4G32150.1	TraesCS6D01G244100.2	AT5G46860.1	24556609

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G037300.1	Wheat	plasma membrane, plastid	100.0	100.0
TraesCS7D01G136300.1	Wheat	endoplasmic reticulum, plasma membrane	99.55	99.55
OQU75937	Sorghum	plasma membrane	90.5	90.5
Os06t0174400-01	Rice	plasma membrane	89.14	89.14
HORVU7Hr1G028250.1	Barley	peroxisome, plasma membrane	98.19	88.21
Zm00001d037483_P002	Maize	plasma membrane	91.4	79.53
GSMUA_Achr6P35140_001	Banana	plasma membrane	76.47	76.82
GSMUA_Achr9P09180_001	Banana	endoplasmic reticulum, plasma membrane	76.47	76.82
TraesCS6A01G371800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	79.64	75.54
VIT_04s0008g05650.t01	Wine grape	extracellular	72.4	72.73
Solyc06g065950.2.1	Tomato	endoplasmic reticulum, nucleus	72.4	72.73
PGSC0003DMT400067225	Potato	mitochondrion	72.4	72.73
KRH73537	Soybean	endoplasmic reticulum	71.95	72.6
CDY61387	Canola	endoplasmic reticulum, plasma membrane	71.95	72.6
Bra040067.1-P	Field mustard	endoplasmic reticulum, plasma membrane	71.95	72.6
CDX75224	Canola	endoplasmic reticulum, plasma membrane	71.95	72.27
AT4G32150.1	Thale cress	golgi, plasma membrane	71.49	72.15
KRH14588	Soybean	endoplasmic reticulum	71.49	72.15
CDX68821	Canola	endoplasmic reticulum, plasma membrane	71.49	71.82
CDX69781	Canola	plasma membrane	69.68	69.68
CDX97084	Canola	plasma membrane	69.23	69.23
Bra008987.1-P	Field mustard	mitochondrion	68.33	68.33
AT2G25340.1	Thale cress	endoplasmic reticulum, plasma membrane	67.42	68.04
AT5G11150.2	Thale cress	golgi, plasma membrane	67.87	66.37
KRH03646	Soybean	plasma membrane	66.06	64.89
KRH20159	Soybean	plastid	65.16	64.29
TraesCS7A01G328000.1	Wheat	plasma membrane	53.39	53.15
Bra011325.1-P	Field mustard	endoplasmic reticulum	65.16	39.45
TraesCS5A01G449900.1	Wheat	unclear	36.2	35.87
TraesCS5A01G003100.1	Wheat	cytosol	34.84	33.19
TraesCS4A01G021800.2	Wheat	cytosol	35.75	31.1
TraesCS7A01G279100.1	Wheat	cytosol, plastid	33.48	30.58

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf
InterPro:Longin_dom	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	PFscan:PS50859	PFscan:PS50892
PANTHER:PTHR21136	PANTHER:PTHR21136:SF104	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G136300	EnsemblPlants:TraesCS7A01G136300.1	TIGR:cd15843	SEG:seg	:

Description

No Description!

Coordinates

chr7A:-:88987157..88989656

Molecular Weight (calculated)

24754.0 Da

IEP (calculated)

9.724

GRAVY (calculated)

-0.026

Length

221 amino acids

Sequence
(BLAST)

001: MPILYAVVAR GATVLAEHSA AATNAGAVAR QVLERLPGGG ADSHVSYTQD RYVFHAKRTD GITALCMADD AAGRRIPFAF LEDIHGKFVK TYGRAALTAL
101: AYAMNDEFSR VLSQQMDYYS NDPSADQINR MRGEISQVRS VMIDNIDKVL ERGDRLDLLV DKTTTMQGNT VRFKRQARRY RSTTWWRNVK LTAALILLLL
201: VIVYIALFFV CHGFTLPTCI R

Best Arabidopsis Sequence Match ( AT5G11150.1 )
(BLAST)

001: MAIIFALVAR GTVVLSEFSA TSTNASSISK QILEKLPGND SDSHMSYSQD RYIFHVKRTD GLTVLCMADE TAGRNIPFAF LDDIHQRFVK TYGRAIHSAQ
101: AYSMNDEFSR VLSQQMEFYS NDPNADRMSR IKGEMSQVRN VMIENIDKVL DRGERLELLV DKTENMQGNT FRFRKQARRY RTIMWWRNVK LTIALILVLA
201: LVVYIAMAFV CHGPSLPSCF K

Arabidopsis Description

ATVAMP713vesicle-associated membrane protein 713 [Source:TAIR;Acc:AT5G11150]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.