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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • nucleus 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG93576
KRH07229
KRH07476
KRH18448
KRH39570
KRH40042
KRH74378

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G32150.1 KRG93576 AT5G39510.1 24556609
AT4G32150.1 KRH18448 AT5G39510.1 24556609
AT4G32150.1 KRH40042 AT5G39510.1 24556609
AT4G32150.1 KRH07229 AT5G46860.1 24556609
AT4G32150.1 KRH07476 AT5G46860.1 24556609
AT4G32150.1 KRH39570 AT5G46860.1 24556609
AT4G32150.1 KRH74378 AT5G46860.1 24556609
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH20159 Soybean plastid 95.11 95.54
VIT_04s0008g05650.t01 Wine grape extracellular 68.89 70.45
PGSC0003DMT400067225 Potato mitochondrion 67.11 68.64
Solyc06g065950.2.1 Tomato endoplasmic reticulum, nucleus 67.11 68.64
KRH73537 Soybean endoplasmic reticulum 66.67 68.49
CDX69781 Canola plasma membrane 67.11 68.33
CDX97084 Canola plasma membrane 67.11 68.33
CDX68821 Canola endoplasmic reticulum, plasma membrane 66.22 67.73
CDX75224 Canola endoplasmic reticulum, plasma membrane 66.22 67.73
GSMUA_Achr6P35140_001 Banana plasma membrane 66.22 67.73
KRH14588 Soybean endoplasmic reticulum 65.78 67.58
Bra008987.1-P Field mustard mitochondrion 66.22 67.42
Bra040067.1-P Field mustard endoplasmic reticulum, plasma membrane 65.33 67.12
CDY61387 Canola endoplasmic reticulum, plasma membrane 65.33 67.12
AT4G32150.1 Thale cress golgi, plasma membrane 64.89 66.67
AT2G25340.1 Thale cress endoplasmic reticulum, plasma membrane 64.89 66.67
GSMUA_Achr9P09180_001 Banana endoplasmic reticulum, plasma membrane 64.89 66.36
TraesCS7B01G037300.1 Wheat plasma membrane, plastid 64.89 66.06
TraesCS7A01G136300.1 Wheat plasma membrane, plastid 64.89 66.06
TraesCS7D01G136300.1 Wheat endoplasmic reticulum, plasma membrane 64.44 65.61
Os06t0174400-01 Rice plasma membrane 64.44 65.61
OQU75937 Sorghum plasma membrane 64.0 65.16
AT5G11150.2 Thale cress golgi, plasma membrane 65.33 65.04
Os02t0803600-01 Rice plasma membrane 63.56 63.27
Zm00001d018408_P001 Maize cytosol 62.67 62.39
TraesCS6A01G371800.1 Wheat cytosol, mitochondrion, peroxisome, plastid 64.44 62.23
EES05972 Sorghum cytosol 62.67 61.84
TraesCS6D01G355800.1 Wheat cytosol, mitochondrion, peroxisome, plastid 64.0 61.8
TraesCS6B01G409400.1 Wheat cytosol, mitochondrion, peroxisome, plastid 63.56 61.37
HORVU7Hr1G028250.1 Barley peroxisome, plasma membrane 65.78 60.16
Zm00001d037483_P002 Maize plasma membrane 64.0 56.69
KRH30399 Soybean endoplasmic reticulum 51.11 52.27
KRH25265 Soybean plasma membrane 50.67 51.82
Bra011325.1-P Field mustard endoplasmic reticulum 63.56 39.18
KRH46773 Soybean endoplasmic reticulum 33.33 33.94
KRG99810 Soybean endoplasmic reticulum 32.89 33.48
KRG90219 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 32.89 33.48
KRH36720 Soybean endoplasmic reticulum 32.0 32.58
KRH11727 Soybean cytosol 31.56 32.13
KRH33448 Soybean extracellular, golgi 8.89 31.75
KRH36005 Soybean endoplasmic reticulum 31.56 29.83
KRG89410 Soybean cytosol 29.78 29.78
KRH50475 Soybean endoplasmic reticulum 29.78 29.78
KRH37118 Soybean cytosol 29.33 29.6
KRH02246 Soybean cytosol 28.89 29.41
KRH50864 Soybean cytosol 28.44 28.96
KRH12042 Soybean cytosol 28.0 28.51
KRG99807 Soybean cytosol 27.56 28.05
KRH33450 Soybean cytosol 21.78 27.84
KRG90750 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 29.33 26.09
KRH57708 Soybean plastid 10.22 19.49
Protein Annotations
Gene3D:1.20.5.110EntrezGene:100782188MapMan:22.7.5.1Gene3D:3.30.450.50EMBL:ACUP02010355EnsemblPlantsGene:GLYMA_17G111000
GO:GO:0000149GO:GO:0003674GO:GO:0005484GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006887GO:GO:0006906
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016192
GO:GO:0031201UniProt:I1MU52InterPro:IPR001388InterPro:IPR010908EnsemblPlants:KRH03646ProteinID:KRH03646
ProteinID:KRH03646.1InterPro:Longin-like_dom_sfInterPro:Longin_domPFAM:PF00957PFAM:PF13774PRINTS:PR00219
ScanProsite:PS00417PFscan:PS50859PFscan:PS50892PANTHER:PTHR21136PANTHER:PTHR21136:SF104SMART:SM01270
SUPFAM:SSF58038SUPFAM:SSF64356InterPro:SynaptobrevinTMHMM:TMhelixUniParc:UPI000233EC62SEG:seg
Description
hypothetical protein
Coordinates
chr17:-:8698181..8702398
Molecular Weight (calculated)
25695.2 Da
IEP (calculated)
9.872
GRAVY (calculated)
-0.120
Length
225 amino acids
Sequence
(BLAST)
001: MGILYGMVAR GQVILAEFSA TQSNASVVAK QILSKINQGS DDTNNDSNVS FSHDRYVFHV KRTDGLTVLC MADDAFGRMI PFAFLEDIHK KFVKTYGRAI
101: LSAPAYAMND EFSRVLNQQM EYYSNDPNAD RLNRLKGEMT QVRTVMIDNI DKVLERGGRL EMLVEKTSAM NSNSIRFKRQ SRRYKNNLWW SNVRLTAALI
201: IIFFIVVYII LAFICHGPLL SSCRR
Best Arabidopsis Sequence Match ( AT5G11150.1 )
(BLAST)
001: MAIIFALVAR GTVVLSEFSA TSTNASSISK QILEKLPGND SDSHMSYSQD RYIFHVKRTD GLTVLCMADE TAGRNIPFAF LDDIHQRFVK TYGRAIHSAQ
101: AYSMNDEFSR VLSQQMEFYS NDPNADRMSR IKGEMSQVRN VMIENIDKVL DRGERLELLV DKTENMQGNT FRFRKQARRY RTIMWWRNVK LTIALILVLA
201: LVVYIAMAFV CHGPSLPSCF K
Arabidopsis Description
ATVAMP713vesicle-associated membrane protein 713 [Source:TAIR;Acc:AT5G11150]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.