Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- golgi 4
- plasma membrane 5
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69781 | Canola | plasma membrane | 88.05 | 90.05 |
| CDX97084 | Canola | plasma membrane | 86.73 | 88.69 |
| Bra008987.1-P | Field mustard | mitochondrion | 86.28 | 88.24 |
| KRH73537 | Soybean | endoplasmic reticulum | 77.88 | 80.37 |
| KRH14588 | Soybean | endoplasmic reticulum | 77.43 | 79.91 |
| AT4G32150.1 | Thale cress | golgi, plasma membrane | 77.43 | 79.91 |
| AT2G25340.1 | Thale cress | endoplasmic reticulum, plasma membrane | 76.55 | 79.0 |
| VIT_04s0008g05650.t01 | Wine grape | extracellular | 76.55 | 78.64 |
| PGSC0003DMT400067225 | Potato | mitochondrion | 73.89 | 75.91 |
| GSMUA_Achr9P09180_001 | Banana | endoplasmic reticulum, plasma membrane | 73.01 | 75.0 |
| Solyc06g065950.2.1 | Tomato | endoplasmic reticulum, nucleus | 73.01 | 75.0 |
| GSMUA_Achr6P35140_001 | Banana | plasma membrane | 72.12 | 74.09 |
| OQU75937 | Sorghum | plasma membrane | 67.7 | 69.23 |
| Os06t0174400-01 | Rice | plasma membrane | 66.81 | 68.33 |
| TraesCS7A01G136300.1 | Wheat | plasma membrane, plastid | 66.37 | 67.87 |
| TraesCS7B01G037300.1 | Wheat | plasma membrane, plastid | 66.37 | 67.87 |
| TraesCS7D01G136300.1 | Wheat | endoplasmic reticulum, plasma membrane | 65.93 | 67.42 |
| KRH03646 | Soybean | plasma membrane | 65.04 | 65.33 |
| KRH20159 | Soybean | plastid | 64.6 | 65.18 |
| Os02t0803600-01 | Rice | plasma membrane | 62.83 | 62.83 |
| EES05972 | Sorghum | cytosol | 62.39 | 61.84 |
| Zm00001d018408_P001 | Maize | cytosol | 61.06 | 61.06 |
| HORVU7Hr1G028250.1 | Barley | peroxisome, plasma membrane | 65.93 | 60.57 |
| Zm00001d037483_P002 | Maize | plasma membrane | 67.7 | 60.24 |
| TraesCS6A01G371800.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 61.95 | 60.09 |
| TraesCS6D01G355800.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 61.5 | 59.66 |
| TraesCS6B01G409400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 61.06 | 59.23 |
| AT5G22360.1 | Thale cress | plasma membrane | 53.1 | 54.3 |
| AT1G04750.1 | Thale cress | endoplasmic reticulum, golgi | 40.27 | 41.55 |
| AT1G04760.2 | Thale cress | cytosol | 38.05 | 39.09 |
| AT2G33120.2 | Thale cress | golgi | 39.38 | 38.86 |
| AT4G15780.1 | Thale cress | cytosol | 28.32 | 34.78 |
| AT2G33110.1 | Thale cress | extracellular, golgi | 31.86 | 33.18 |
| AT3G54300.3 | Thale cress | cytosol | 34.51 | 32.5 |
| AT2G32670.1 | Thale cress | endoplasmic reticulum, golgi | 38.05 | 30.18 |
| AT3G24890.2 | Thale cress | cytosol | 13.27 | 24.19 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:22.7.5.1 | Gene3D:3.30.450.50 | EntrezGene:830984 | UniProt:A0A1P8BEB3 | ProteinID:ANM69907.1 |
| ArrayExpress:AT5G11150 | EnsemblPlantsGene:AT5G11150 | RefSeq:AT5G11150 | TAIR:AT5G11150 | RefSeq:AT5G11150-TAIR-G | EnsemblPlants:AT5G11150.2 |
| Symbol:ATVAMP713 | Unigene:At.5977 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016192 | InterPro:IPR001388 | InterPro:IPR010908 | InterPro:Longin-like_dom_sf | InterPro:Longin_dom |
| RefSeq:NP_001331552.1 | PFAM:PF00957 | PFAM:PF13774 | PRINTS:PR00219 | ScanProsite:PS00417 | PFscan:PS50859 |
| PFscan:PS50892 | PANTHER:PTHR21136 | PANTHER:PTHR21136:SF104 | SMART:SM01270 | SUPFAM:SSF58038 | SUPFAM:SSF64356 |
| SignalP:SignalP-noTM | InterPro:Synaptobrevin | TMHMM:TMhelix | UniParc:UPI000848C1F2 | SEG:seg | : |
Description
ATVAMP713vesicle-associated membrane protein 713 [Source:TAIR;Acc:AT5G11150]
Coordinates
chr5:-:3546286..3548111
Molecular Weight (calculated)
25897.4 Da
IEP (calculated)
8.889
GRAVY (calculated)
-0.085
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIIFALVAR GTVVLSEFSA TSTNASSISK QILEKLPGND SDSHMSYSQD RYIFHVKRTD GLTVLCMADE TAGRNIPFAF LDDIHQRFVK TYGRAIHSAQ
101: AYSMNDEFSR VLSQQMEFYS NDPNADRMSR IKGEMSQVRN VMIENIDKVL DRGERLELLV DKTENMQGNT FRFRKQARRY RTIMWWRNVK LTIALILVLA
201: LVVYIAMAFV CHGPSLPSCF NFCLLL
101: AYSMNDEFSR VLSQQMEFYS NDPNADRMSR IKGEMSQVRN VMIENIDKVL DRGERLELLV DKTENMQGNT FRFRKQARRY RTIMWWRNVK LTIALILVLA
201: LVVYIAMAFV CHGPSLPSCF NFCLLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.