Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09133 | Canola | endoplasmic reticulum | 93.67 | 93.67 |
| CDX70999 | Canola | endoplasmic reticulum | 93.67 | 93.67 |
| Bra020187.1-P | Field mustard | endoplasmic reticulum | 93.67 | 93.67 |
| CDX88799 | Canola | plasma membrane | 93.21 | 93.21 |
| Bra006623.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 93.21 | 93.21 |
| VIT_06s0080g00800.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 88.69 | 89.09 |
| KRH25265 | Soybean | plasma membrane | 85.07 | 85.45 |
| KRH30399 | Soybean | endoplasmic reticulum | 84.62 | 85.0 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 82.35 | 83.49 |
| Zm00001d052756_P001 | Maize | endoplasmic reticulum | 72.85 | 83.42 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 81.9 | 83.03 |
| EES13179 | Sorghum | endoplasmic reticulum, plasma membrane | 81.9 | 81.53 |
| TraesCS7D01G324800.1 | Wheat | plasma membrane | 81.45 | 81.08 |
| TraesCS7B01G228700.1 | Wheat | plasma membrane | 81.45 | 81.08 |
| TraesCS7A01G328000.1 | Wheat | plasma membrane | 81.45 | 81.08 |
| HORVU7Hr1G078500.1 | Barley | plasma membrane | 81.0 | 80.63 |
| Os10t0154000-01 | Rice | plasma membrane | 81.0 | 79.2 |
| PGSC0003DMT400015063 | Potato | plastid | 76.47 | 74.12 |
| Solyc06g074250.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 85.52 | 72.41 |
| AT4G32150.1 | Thale cress | golgi, plasma membrane | 54.3 | 54.79 |
| AT2G25340.1 | Thale cress | endoplasmic reticulum, plasma membrane | 53.39 | 53.88 |
| AT5G11150.2 | Thale cress | golgi, plasma membrane | 54.3 | 53.1 |
| AT1G04750.1 | Thale cress | endoplasmic reticulum, golgi | 38.46 | 38.81 |
| AT2G33120.2 | Thale cress | golgi | 38.46 | 37.12 |
| AT1G04760.2 | Thale cress | cytosol | 36.65 | 36.82 |
| AT2G33110.1 | Thale cress | extracellular, golgi | 33.48 | 34.1 |
| AT4G15780.1 | Thale cress | cytosol | 26.7 | 32.07 |
| AT3G54300.3 | Thale cress | cytosol | 33.94 | 31.25 |
| AT2G32670.1 | Thale cress | endoplasmic reticulum, golgi | 37.56 | 29.12 |
| AT3G24890.2 | Thale cress | cytosol | 14.48 | 25.81 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:22.7.5.1 | Gene3D:3.30.450.50 | EntrezGene:832297 | UniProt:A0A178UJ92 | ProteinID:AED93017.1 |
| ArrayExpress:AT5G22360 | EnsemblPlantsGene:AT5G22360 | RefSeq:AT5G22360 | TAIR:AT5G22360 | RefSeq:AT5G22360-TAIR-G | EnsemblPlants:AT5G22360.1 |
| TAIR:AT5G22360.1 | Symbol:ATVAMP714 | EMBL:AY057699 | EMBL:AY116956 | ProteinID:BAB08335.1 | GO:GO:0000139 |
| GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0006887 | GO:GO:0006906 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 |
| GO:GO:0031201 | InterPro:IPR001388 | InterPro:IPR010908 | InterPro:Longin-like_dom_sf | InterPro:Longin_dom | RefSeq:NP_197628.1 |
| ProteinID:OAO93779.1 | PFAM:PF00957 | PFAM:PF13774 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00219 | ScanProsite:PS00417 |
| PFscan:PS50859 | PFscan:PS50892 | PANTHER:PTHR21136 | PANTHER:PTHR21136:SF165 | UniProt:Q9FMR5 | SMART:SM01270 |
| SUPFAM:SSF58038 | SUPFAM:SSF64356 | InterPro:Synaptobrevin | TMHMM:TMhelix | UniParc:UPI0000138030 | SEG:seg |
Description
VAMP714Vesicle-associated membrane protein 714 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMR5]
Coordinates
chr5:-:7404004..7405883
Molecular Weight (calculated)
25318.1 Da
IEP (calculated)
9.236
GRAVY (calculated)
0.072
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIVYAVVAR GTVVLAEFSA VTGNTGAVVR RILEKLSPEI SDERLCFSQD RYIFHILRSD GLTFLCMAND TFGRRVPFSY LEEIHMRFMK NYGKVAHNAP
101: AYAMNDEFSR VLHQQMEFFS SNPSVDTLNR VRGEVSEIRS VMVENIEKIM ERGDRIELLV DKTATMQDSS FHFRKQSKRL RRALWMKNAK LLVLLTCLIV
201: FLLYIIIASF CGGITLPSCR S
101: AYAMNDEFSR VLHQQMEFFS SNPSVDTLNR VRGEVSEIRS VMVENIEKIM ERGDRIELLV DKTATMQDSS FHFRKQSKRL RRALWMKNAK LLVLLTCLIV
201: FLLYIIIASF CGGITLPSCR S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.