CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91121
KXG19496
KXG27287
KXG31260
OQU82335

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G22360.1	EER91121	AT1G16500.1	21798944
AT5G22360.1	OQU82335	AT1G16500.1	21798944
AT5G22360.1	KXG27287	AT1G22920.1	21798944
AT5G22360.1	KXG19496	AT2G24100.1	21798944
AT5G22360.1	KXG31260	AT2G24100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052756_P001	Maize	endoplasmic reticulum	86.49	99.48
TraesCS7A01G328000.1	Wheat	plasma membrane	92.79	92.79
TraesCS7B01G228700.1	Wheat	plasma membrane	92.79	92.79
TraesCS7D01G324800.1	Wheat	plasma membrane	92.79	92.79
HORVU7Hr1G078500.1	Barley	plasma membrane	92.34	92.34
Os10t0154000-01	Rice	plasma membrane	92.34	90.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	85.14	86.7
GSMUA_Achr11P...	Banana	endoplasmic reticulum	85.14	86.7
VIT_06s0080g00800.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.78	84.55
KRH25265	Soybean	plasma membrane	82.43	83.18
KRH30399	Soybean	endoplasmic reticulum	81.98	82.73
CDX70999	Canola	endoplasmic reticulum	81.98	82.35
CDY09133	Canola	endoplasmic reticulum	81.53	81.9
Bra020187.1-P	Field mustard	endoplasmic reticulum	81.53	81.9
AT5G22360.1	Thale cress	plasma membrane	81.53	81.9
CDX88799	Canola	plasma membrane	81.08	81.45
Bra006623.1-P	Field mustard	endoplasmic reticulum, plasma membrane	80.63	81.0
PGSC0003DMT400015063	Potato	plastid	76.58	74.56
Solyc06g074250.2.1	Tomato	endoplasmic reticulum, plasma membrane	81.98	69.73
OQU75937	Sorghum	plasma membrane	54.95	55.2
EES05972	Sorghum	cytosol	52.7	51.32
EER96027	Sorghum	extracellular	38.29	38.29
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.49	36.82
EES09956	Sorghum	cytosol, mitochondrion, nucleus, plastid	13.51	36.14
KXG40114	Sorghum	cytosol, vacuole	35.14	35.45
KXG24150	Sorghum	cytosol	34.23	33.19
KXG25383	Sorghum	plastid	35.59	32.78
KXG34786	Sorghum	cytosol	32.43	28.92

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	EntrezGene:8064315	UniProt:C5YLC8	EnsemblPlants:EES13179
ProteinID:EES13179	ProteinID:EES13179.1	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0006887	GO:GO:0006906	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192
GO:GO:0031201	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PFAM:PF00957
PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF165	SMART:SM01270	EnsemblPlantsGene:SORBI_3007G001200	SUPFAM:SSF58038	SUPFAM:SSF64356	unigene:Sbi.4147
SignalP:SignalP-noTM	InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI0001A876B0	RefSeq:XP_002443684.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:120054..122392

Molecular Weight (calculated)

25033.7 Da

IEP (calculated)

9.697

GRAVY (calculated)

0.183

Length

222 amino acids

Sequence
(BLAST)

001: MAIVYALVAR GTVVLAEFAA VSGNAGAVAR RILEKLPPDA ESRLCFAQDR YIFHVLRSDA AGITFLCMAN DTFGRRIPFL YLEDIQMRFM KNYGRVAHSA
101: LAYAMNDEFS RVLHQQMEFF SSNPSADTLN RLRGEVSEIH TVMVDNIEKI LDRGDRISLL VDKTSTMQDS SFHFRKQSKR LRRALWMKNA KLLVVLTVVI
201: VVLLYLIISA FCGGLSLSSC RS

Best Arabidopsis Sequence Match ( AT5G22360.1 )
(BLAST)

001: MAIVYAVVAR GTVVLAEFSA VTGNTGAVVR RILEKLSPEI SDERLCFSQD RYIFHILRSD GLTFLCMAND TFGRRVPFSY LEEIHMRFMK NYGKVAHNAP
101: AYAMNDEFSR VLHQQMEFFS SNPSVDTLNR VRGEVSEIRS VMVENIEKIM ERGDRIELLV DKTATMQDSS FHFRKQSKRL RRALWMKNAK LLVLLTCLIV
201: FLLYIIIASF CGGITLPSCR S

Arabidopsis Description

VAMP714Vesicle-associated membrane protein 714 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMR5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.