CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 1
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031942_P003	Maize	plastid	98.76	98.76
TraesCS7D01G278900.1	Wheat	plasma membrane, plastid	94.61	94.21
TraesCS7A01G279100.1	Wheat	cytosol, plastid	94.61	94.21
TraesCS7B01G181100.1	Wheat	cytosol, plastid	94.19	93.8
Os08t0558600-01	Rice	extracellular	89.63	89.63
GSMUA_Achr8P32930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.42	79.41
VIT_13s0101g00410.t01	Wine grape	endoplasmic reticulum, golgi	77.18	77.82
KRH36005	Soybean	endoplasmic reticulum	76.35	77.31
CDX67594	Canola	cytosol	74.69	74.69
CDY07551	Canola	cytosol	74.27	74.58
PGSC0003DMT400061574	Potato	endoplasmic reticulum, mitochondrion, plasma membrane	74.27	74.58
CDX76153	Canola	cytosol	74.69	74.38
Bra003177.1-P	Field mustard	cytosol	74.27	74.27
Solyc11g006780.1.1	Tomato	cytosol, mitochondrion, plasma membrane	73.86	74.17
AT3G54300.3	Thale cress	cytosol	73.44	73.75
Bra014823.1-P	Field mustard	golgi	73.86	73.55
Bra007063.1-P	Field mustard	cytosol, plasma membrane	73.03	73.33
CDX78228	Canola	cytosol, plasma membrane	72.61	72.92
CDX73490	Canola	plasma membrane	72.2	72.2
CDY13199	Canola	plasma membrane	55.19	66.83
EES09956	Sorghum	cytosol, mitochondrion, nucleus, plastid	21.99	63.86
KRG90750	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	66.81	63.64
EER96027	Sorghum	extracellular	56.85	61.71
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.6	60.91
KXG40114	Sorghum	cytosol, vacuole	51.87	56.82
KXG24150	Sorghum	cytosol	49.38	51.97
KXG34786	Sorghum	cytosol	46.06	44.58
EES13179	Sorghum	endoplasmic reticulum, plasma membrane	32.78	35.59
EES05972	Sorghum	cytosol	33.61	35.53
OQU75937	Sorghum	plasma membrane	31.12	33.94

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	UniProt:A0A1B6PI73	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:IPR001388	InterPro:IPR010908
EnsemblPlants:KXG25383	ProteinID:KXG25383	ProteinID:KXG25383.1	ProteinID:KXG25384.1	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
ProteinID:OQU80709.1	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859
PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF169	SMART:SM01270	EnsemblPlantsGene:SORBI_3007G168600	SUPFAM:SSF58038
SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI0001C80CB3	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:60355991..60358910

Molecular Weight (calculated)

27518.1 Da

IEP (calculated)

6.715

GRAVY (calculated)

-0.204

Length

241 amino acids

Sequence
(BLAST)

001: MNSSKQALIY SFVAKGSVVL AEHTAFSGNF STVAVQCLQK LPPNSTRSTY SCDGHTFNFL VDRGFVFLVV ADEAAGRSVP FVFLERVRED FMQRYGSSID
101: EEGQHPLADD ADEDDFLFED RFSIAYNLDR EFGPRLKDHM QYCVNHPEEI NKLSKVKAHL SDVKGIMMDN IEKILDRGEK IELLVGKTET LQSQADSFHR
201: HGRELRRKMW LQNLRFKLMV GGGILALILI LWLMVCRGFK C

Best Arabidopsis Sequence Match ( AT3G54300.1 )
(BLAST)

001: MSQKGLIYSF VAKGTVVLAE HTPYSGNFST IAVQCLQKLP TNSSKYTYSC DGHTFNFLVD NGFVFLVVAD ESTGRSVPFV FLERVKEDFK KRYEASIKND
101: ERHPLADEDE DDDLFGDRFS VAYNLDREFG PILKEHMQYC MSHPEEMSKL SKLKAQITEV KGIMMDNIEK VLDRGEKIEL LVDKTENLQF QADSFQRQGR
201: QLRRKMWLQS LQMKLMVAGA VFSFILIVWV VACGGFKCSS

Arabidopsis Description

VAMP727Vesicle-associated membrane protein 727 [Source:UniProtKB/Swiss-Prot;Acc:Q9M376]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.