Factsheet for TraesCS7B01G181100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G278900.1	Wheat	plasma membrane, plastid	98.76	98.76
TraesCS7A01G279100.1	Wheat	cytosol, plastid	98.76	98.76
KXG25383	Sorghum	plastid	93.8	94.19
Zm00001d031942_P003	Maize	plastid	93.39	93.78
Os08t0558600-01	Rice	extracellular	89.67	90.04
GSMUA_Achr8P32930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.51	79.83
VIT_13s0101g00410.t01	Wine grape	endoplasmic reticulum, golgi	76.45	77.41
KRH36005	Soybean	endoplasmic reticulum	76.03	77.31
PGSC0003DMT400061574	Potato	endoplasmic reticulum, mitochondrion, plasma membrane	74.38	75.0
Solyc11g006780.1.1	Tomato	cytosol, mitochondrion, plasma membrane	73.97	74.58
AT3G54300.3	Thale cress	cytosol	73.14	73.75
CDX67594	Canola	cytosol	73.14	73.44
CDY07551	Canola	cytosol	72.73	73.33
CDX76153	Canola	cytosol	73.14	73.14
Bra003177.1-P	Field mustard	cytosol	72.73	73.03
Bra007063.1-P	Field mustard	cytosol, plasma membrane	71.9	72.5
Bra014823.1-P	Field mustard	golgi	72.31	72.31
CDX78228	Canola	cytosol, plasma membrane	71.49	72.08
CDX73490	Canola	plasma membrane	71.07	71.37
CDY13199	Canola	plasma membrane	54.55	66.33
EES09956	Sorghum	cytosol, mitochondrion, nucleus, plastid	21.9	63.86
KRG90750	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	65.7	62.85
TraesCS5B01G457700.1	Wheat	vacuole	53.72	58.56
TraesCS4B01G281700.1	Wheat	cytosol	49.59	47.24
TraesCS7B01G228700.1	Wheat	plasma membrane	32.23	35.14
TraesCS7B01G037300.1	Wheat	plasma membrane, plastid	30.17	33.03
TraesCS6B01G409400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	28.93	30.04
TraesCS3B01G193500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.59	26.79

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005768	GO:GO:0006623	GO:GO:0006810	GO:GO:0007033	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0031201
GO:GO:0033263	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PFAM:PF00957
PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF169	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS7B01G181100	EnsemblPlants:TraesCS7B01G181100.1	TIGR:cd15843	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:+:272718675..272720528

Molecular Weight (calculated)

27774.4 Da

IEP (calculated)

6.309

GRAVY (calculated)

-0.201

Length

242 amino acids

Sequence
(BLAST)

001: MNGGSKQTLI YSFVAKGSVV LAEHTAFSGN FSTIAVQCLQ KLPSNSTRST YSCDGHTFNF LVDRDFVFLV VAEEALGRSV PFVFLERVRE DFMQRYGSSI
101: DEEGQHPLAD DADEDDFLFE DRFSIAYNLD REFGPRLKDH MQYCINHPEE ISKLSKVKSH LSEVKGIMMD NIEKILDRGE KIELLVGKTE TLQSQADSFH
201: RHGRELRRKM WLQNLRFKLM VGGGIAFLIL ILWLMVCWGF KC

Best Arabidopsis Sequence Match ( AT3G54300.1 )
(BLAST)

001: MSQKGLIYSF VAKGTVVLAE HTPYSGNFST IAVQCLQKLP TNSSKYTYSC DGHTFNFLVD NGFVFLVVAD ESTGRSVPFV FLERVKEDFK KRYEASIKND
101: ERHPLADEDE DDDLFGDRFS VAYNLDREFG PILKEHMQYC MSHPEEMSKL SKLKAQITEV KGIMMDNIEK VLDRGEKIEL LVDKTENLQF QADSFQRQGR
201: QLRRKMWLQS LQMKLMVAGA VFSFILIVWV VACGGFKCSS

Arabidopsis Description

VAMP727Vesicle-associated membrane protein 727 [Source:UniProtKB/Swiss-Prot;Acc:Q9M376]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.