Factsheet for TraesCS7B01G228700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G459300.1
TraesCS2A01G459400.1
TraesCS2A01G459500.1
TraesCS2A01G504600.1
TraesCS2B01G480800.1
TraesCS2B01G480900.1
TraesCS2B01G481200.1
TraesCS2B01G481300.1
TraesCS2D01G459600.1
TraesCS2D01G459700.1
TraesCS2D01G459800.1
TraesCS2D01G505300.1
TraesCS4A01G296700.1
TraesCS4B01G017000.1
TraesCS4D01G015300.1
TraesCS6A01G354900.1
TraesCS6B01G387700.1
TraesCS6D01G337100.2
TraesCS7A01G151300.1
TraesCS7B01G055300.1
TraesCS7D01G153200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G22360.1	TraesCS2A01G459300.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2A01G459400.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2A01G459500.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2B01G480800.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2B01G480900.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2B01G481200.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2B01G481300.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2D01G459600.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2D01G459700.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2D01G459800.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS4A01G296700.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS4B01G017000.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS4D01G015300.1	AT1G16500.1	21798944
AT5G22360.1	TraesCS2A01G504600.1	AT1G22920.1	21798944
AT5G22360.1	TraesCS2D01G505300.1	AT1G22920.1	21798944
AT5G22360.1	TraesCS6A01G354900.1	AT2G24100.1	21798944
AT5G22360.1	TraesCS6B01G387700.1	AT2G24100.1	21798944
AT5G22360.1	TraesCS6D01G337100.2	AT2G24100.1	21798944
AT5G22360.1	TraesCS7A01G151300.1	AT2G24100.1	21798944
AT5G22360.1	TraesCS7B01G055300.1	AT2G24100.1	21798944
AT5G22360.1	TraesCS7D01G153200.1	AT2G24100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G328000.1	Wheat	plasma membrane	100.0	100.0
TraesCS7D01G324800.1	Wheat	plasma membrane	99.55	99.55
HORVU7Hr1G078500.1	Barley	plasma membrane	99.55	99.55
Zm00001d052756_P001	Maize	endoplasmic reticulum	81.98	94.3
EES13179	Sorghum	endoplasmic reticulum, plasma membrane	92.79	92.79
Os10t0154000-01	Rice	plasma membrane	92.79	91.15
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	83.78	85.32
GSMUA_Achr11P...	Banana	endoplasmic reticulum	83.78	85.32
VIT_06s0080g00800.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.88	83.64
KRH25265	Soybean	plasma membrane	81.53	82.27
KRH30399	Soybean	endoplasmic reticulum	81.53	82.27
CDY09133	Canola	endoplasmic reticulum	81.53	81.9
Bra020187.1-P	Field mustard	endoplasmic reticulum	81.53	81.9
AT5G22360.1	Thale cress	plasma membrane	81.08	81.45
CDX88799	Canola	plasma membrane	80.63	81.0
Bra006623.1-P	Field mustard	endoplasmic reticulum, plasma membrane	80.18	80.54
CDX70999	Canola	endoplasmic reticulum	80.18	80.54
PGSC0003DMT400015063	Potato	plastid	75.23	73.25
Solyc06g074250.2.1	Tomato	endoplasmic reticulum, plasma membrane	81.53	69.35
TraesCS7B01G037300.1	Wheat	plasma membrane, plastid	53.15	53.39
TraesCS6B01G409400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	50.0	47.64
TraesCS5B01G457700.1	Wheat	vacuole	36.04	36.04
TraesCS7B01G181100.1	Wheat	cytosol, plastid	35.14	32.23
TraesCS4B01G281700.1	Wheat	cytosol	35.59	31.1
TraesCS3B01G193500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.33	16.52

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628
GO:GO:0009651	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:IPR001388	InterPro:IPR010908
InterPro:Longin-like_dom_sf	InterPro:Longin_dom	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417
PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF165	SMART:SM01270	SUPFAM:SSF58038
SUPFAM:SSF64356	SignalP:SignalP-noTM	InterPro:Synaptobrevin	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7B01G228700	EnsemblPlants:TraesCS7B01G228700.1
TIGR:cd15843	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:428926403..428928322

Molecular Weight (calculated)

24967.7 Da

IEP (calculated)

9.697

GRAVY (calculated)

0.191

Length

222 amino acids

Sequence
(BLAST)

001: MAIVYALVAR GTVVLAEFAA VSGNAGAVAR RILEKLPSEA EARLCFAQDR YIFHVLRSPA DGLTFLCMAN DTFGRRVPFI YLEDIQMRFM KNYGRVAHSA
101: LAYAMNDEFA RVLHQQMEFF SSNPSADTLN RLRGEVSEIH TVMVDNIEKI LDRGDRISLL VDKTSTMQDS GFHFRKQSKR LRRALWMKNV KLLAVLTAVI
201: VLLLYLIIAA FCGGLSLPSC RS

Best Arabidopsis Sequence Match ( AT5G22360.1 )
(BLAST)

001: MAIVYAVVAR GTVVLAEFSA VTGNTGAVVR RILEKLSPEI SDERLCFSQD RYIFHILRSD GLTFLCMAND TFGRRVPFSY LEEIHMRFMK NYGKVAHNAP
101: AYAMNDEFSR VLHQQMEFFS SNPSVDTLNR VRGEVSEIRS VMVENIEKIM ERGDRIELLV DKTATMQDSS FHFRKQSKRL RRALWMKNAK LLVLLTCLIV
201: FLLYIIIASF CGGITLPSCR S

Arabidopsis Description

VAMP714Vesicle-associated membrane protein 714 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMR5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.