Factsheet for TraesCS2B01G481300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G172000.1
TraesCS3B01G202800.2
TraesCS3D01G178500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G16500.1	TraesCS3A01G172000.1	AT4G02150.1	21798944
AT1G16500.1	TraesCS3B01G202800.2	AT4G02150.1	21798944
AT1G16500.1	TraesCS3D01G178500.1	AT4G02150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G481200.1	Wheat	cytosol	98.64	98.64
TraesCS2D01G459800.1	Wheat	nucleus	94.57	94.57
HORVU2Hr1G104270.1	Barley	cytosol	72.4	90.4
TraesCS2A01G459500.1	Wheat	cytosol	91.86	87.88
TraesCS2B01G480900.1	Wheat	cytosol	81.45	86.96
TraesCS2B01G480800.1	Wheat	cytosol	83.71	83.33
Os04t0617700-01	Rice	cytosol, plasma membrane, plastid	18.55	67.21
Zm00001d002301_P001	Maize	cytosol, nucleus, plastid	63.8	65.28
OQU82335	Sorghum	plastid	64.25	49.82
Solyc07g066570.2.1	Tomato	cytosol	34.39	40.0
GSMUA_Achr1P25720_001	Banana	cytosol	37.1	38.32
GSMUA_Achr7P03500_001	Banana	cytosol	36.65	37.85
PGSC0003DMT400056874	Potato	cytosol	35.75	35.91
GSMUA_Achr9P30650_001	Banana	cytosol	35.75	35.11
GSMUA_AchrUn_...	Banana	cytosol	32.58	34.45
GSMUA_Achr11P...	Banana	cytosol	37.56	34.44
VIT_10s0092g00640.t01	Wine grape	cytosol	33.48	33.64
VIT_19s0085g00030.t01	Wine grape	cytosol	32.13	33.02
Bra026718.1-P	Field mustard	nucleus	34.84	31.82
CDY51001	Canola	nucleus	34.39	31.15
KRH13717	Soybean	nucleus	35.29	31.08
TraesCS4B01G017000.1	Wheat	nucleus	31.22	30.94
CDY37016	Canola	nucleus	33.03	30.93
CDX88511	Canola	nucleus	33.03	30.93
CDX76373	Canola	nucleus	33.03	30.93
Bra035096.1-P	Field mustard	nucleus	32.58	30.9
AT1G79160.1	Thale cress	cytosol	33.03	30.54
CDX81765	Canola	cytosol	33.03	30.29
Bra026046.1-P	Field mustard	cytosol, nucleus, plastid	33.48	30.2
CDX79304	Canola	cytosol	30.77	30.09
AT1G16500.1	Thale cress	cytosol	34.84	29.73
CDY55881	Canola	cytosol, nucleus, plastid	32.58	29.39
CDY68470	Canola	cytosol, nucleus, plastid	31.67	28.57

Protein Annotations

EnsemblPlants:TraesCS2B01G481300.1

EnsemblPlantsGene:TraesCS2B01G481300

PANTHER:PTHR33177

PANTHER:PTHR33177:SF6

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr2B:+:679730052..679744313

Molecular Weight (calculated)

22847.8 Da

IEP (calculated)

6.500

GRAVY (calculated)

-0.339

Length

221 amino acids

Sequence
(BLAST)

001: MAPELSPIAR MLRGEAGNGR GGAAKPSEMV TMDLLGGCGG DAGVEDEVVD LEVKVPAGWE RRLDLLSGKT FLTPHRHQAA QDGHQDLNQP PTASTPAAVT
101: TTSAAFCTLD MVRYALERAA AARSATSPDT LSSSLASTSS SSSSLGKRSR SPPSSTGSPA ANPAMRACAC PSCFTYVLIA EADPWCPRCA SKVPPLPSKP
201: AAHSSGKKPR IDLNADADET E

Best Arabidopsis Sequence Match ( AT1G79160.1 )
(BLAST)

001: MILDMAADVS SLVRLLSGYK DDRAVVKDSA GAKSSAALMT RDLLGNGRGG GGDRSLELDL DLQVPTGYEK RLDLKSGKVY LQRCNSTSSS SITNADQTNQ
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI

Arabidopsis Description

Filamentous hemagglutinin transporter [Source:UniProtKB/TrEMBL;Acc:Q84JL6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.