Factsheet for VIT_10s0092g00640.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0085g00030.t01	Wine grape	cytosol	49.55	50.7
GSMUA_AchrUn_...	Banana	cytosol	38.64	40.67
GSMUA_Achr7P03500_001	Banana	cytosol	36.82	37.85
Os04t0617700-01	Rice	cytosol, plasma membrane, plastid	10.45	37.7
GSMUA_Achr1P25720_001	Banana	cytosol	36.36	37.38
HORVU2Hr1G104270.1	Barley	cytosol	28.64	35.59
Zm00001d002301_P001	Maize	cytosol, nucleus, plastid	34.55	35.19
GSMUA_Achr11P...	Banana	cytosol	38.18	34.85
TraesCS2B01G481200.1	Wheat	cytosol	34.09	33.94
TraesCS2B01G480900.1	Wheat	cytosol	31.82	33.82
TraesCS2D01G459700.1	Wheat	cytosol	31.82	33.65
TraesCS2D01G459600.1	Wheat	cytosol	34.09	33.63
TraesCS2B01G481300.1	Wheat	cytosol	33.64	33.48
TraesCS2D01G459800.1	Wheat	nucleus	33.64	33.48
TraesCS2B01G480800.1	Wheat	cytosol	33.18	32.88
TraesCS2A01G459300.1	Wheat	cytosol	33.18	32.74
TraesCS2A01G459400.1	Wheat	cytosol	31.36	32.55
TraesCS2A01G459500.1	Wheat	cytosol	33.64	32.03
GSMUA_Achr9P30650_001	Banana	cytosol	32.73	32.0
Zm00001d013614_P001	Maize	cytosol	10.45	29.87
TraesCS4B01G017000.1	Wheat	nucleus	30.0	29.6
Zm00001d033459_P001	Maize	cytosol	30.45	29.52
TraesCS4D01G015300.1	Wheat	cytosol	30.45	29.26
HORVU2Hr1G104300.1	Barley	cytosol, nucleus	33.64	29.13
EER91121	Sorghum	cytosol	31.82	29.05
Zm00001d013615_P001	Maize	cytosol	30.0	28.82
TraesCS4A01G296700.1	Wheat	nucleus	30.0	28.7
HORVU0Hr1G005480.2	Barley	cytosol	25.91	27.01
OQU82335	Sorghum	plastid	34.09	26.32
Os03t0660700-01	Rice	nucleus	22.27	25.52
HORVU4Hr1G002540.1	Barley	plastid	28.18	18.51

Protein Annotations

EntrezGene:100254564	wikigene:100254564	MapMan:35.2	EMBL:AM483844	ProteinID:CAN73105	ProteinID:CAN73105.1
ProteinID:CBI39032	ProteinID:CBI39032.3	ncoils:Coil	UniProt:D7U8G8	EMBL:FN596741	EntrezGene:LOC100254564
wikigene:LOC100254564	PANTHER:PTHR33177	PANTHER:PTHR33177:SF6	TIGR:TC53500	TIGR:TC54801	TIGR:TC64431
UniParc:UPI00019842BB	ArrayExpress:VIT_10s0092g00640	EnsemblPlantsGene:VIT_10s0092g00640	EnsemblPlants:VIT_10s0092g00640.t01	unigene:Vvi.2723	RefSeq:XP_002278715
RefSeq:XP_002278715.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:12328573..12329617

Molecular Weight (calculated)

24197.9 Da

IEP (calculated)

8.193

GRAVY (calculated)

-0.467

Length

220 amino acids

Sequence
(BLAST)

001: MAAEVGTLLR ILNARKEEKL RNEATVLITR DLLGSCSKAA SADLDLDLQV PTGWEKRLDL KSGKVYVQRC KSPSPKSWSE EPALRDLNVP PLNLLEDSCL
101: ELKLLPSSHY QSVCTLDKVK SALERAEKEA SKKRSSPPMS LSSSLTTREE GDDEEEKQSW SLSSTSTSPA SSSGMFAAGC PVCLLYVMTY RKNPKCPRCD
201: SIVPSPSAFK KPRIDLNASF

Best Arabidopsis Sequence Match ( AT1G79160.1 )
(BLAST)

001: MILDMAADVS SLVRLLSGYK DDRAVVKDSA GAKSSAALMT RDLLGNGRGG GGDRSLELDL DLQVPTGYEK RLDLKSGKVY LQRCNSTSSS SITNADQTNQ
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI

Arabidopsis Description

Filamentous hemagglutinin transporter [Source:UniProtKB/TrEMBL;Acc:Q84JL6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.