Factsheet for Os03t0660700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0253300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G16500.1	Os01t0253300-01	AT4G02150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013614_P001	Maize	cytosol	21.88	54.55
Zm00001d033459_P001	Maize	cytosol	52.6	44.49
Zm00001d013615_P001	Maize	cytosol	50.0	41.92
TraesCS4D01G015300.1	Wheat	cytosol	47.4	39.74
EER91121	Sorghum	cytosol	48.44	38.59
TraesCS4A01G296700.1	Wheat	nucleus	45.83	38.26
TraesCS4B01G017000.1	Wheat	nucleus	40.1	34.53
GSMUA_Achr7P03500_001	Banana	cytosol	28.12	25.23
HORVU4Hr1G002540.1	Barley	plastid	43.23	24.78
GSMUA_AchrUn_...	Banana	cytosol	26.56	24.4
Solyc07g066570.2.1	Tomato	cytosol	23.96	24.21
PGSC0003DMT400056874	Potato	cytosol	26.56	23.18
GSMUA_Achr9P30650_001	Banana	cytosol	26.56	22.67
GSMUA_Achr1P25720_001	Banana	cytosol	25.0	22.43
VIT_19s0085g00030.t01	Wine grape	cytosol	25.0	22.33
VIT_10s0092g00640.t01	Wine grape	cytosol	25.52	22.27
KRH13717	Soybean	nucleus	28.65	21.91
AT1G79160.1	Thale cress	cytosol	27.08	21.76
GSMUA_Achr11P...	Banana	cytosol	26.04	20.75
AT1G16500.1	Thale cress	cytosol	26.56	19.69
CDY51001	Canola	nucleus	25.0	19.67
Bra026718.1-P	Field mustard	nucleus	24.48	19.42
Bra035096.1-P	Field mustard	nucleus	22.92	18.88
CDX79304	Canola	cytosol	21.88	18.58
CDY55881	Canola	cytosol, nucleus, plastid	23.44	18.37
CDX81765	Canola	cytosol	22.92	18.26
CDX76373	Canola	nucleus	22.4	18.22
CDY37016	Canola	nucleus	22.4	18.22
CDX88511	Canola	nucleus	22.4	18.22
CDY68470	Canola	cytosol, nucleus, plastid	22.92	17.96
Bra026046.1-P	Field mustard	cytosol, nucleus, plastid	22.92	17.96
Os04t0617700-01	Rice	cytosol, plasma membrane, plastid	2.08	6.56

Protein Annotations

EnsemblPlants:Os03t0660700-01	EnsemblPlantsGene:Os03g0660700	PANTHER:PTHR33177	PANTHER:PTHR33177:SF7	ProteinID:AAS07114.1	ProteinID:BAF12738.1
ProteinID:BAS85601.1	SEG:seg	UniParc:UPI000023955D	UniProt:Q75GQ2	MapMan:35.2	:

Description

Conserved hypothetical protein. (Os03t0660700-01)

Coordinates

chr3:-:25908352..25910162

Molecular Weight (calculated)

19650.7 Da

IEP (calculated)

10.722

GRAVY (calculated)

-0.430

Length

192 amino acids

Sequence
(BLAST)

001: MVAGALGYMA RAADGGRAAE LVTRDFLGGC VAADDARDAA AAAAATARHD SVSGKLSLQK QTCPATPTDL NLFPVPGAAA SAAKPCPSST AAAASGAGGT
101: TTTTTTYHSV CTIEKVKTAL ERFERGKHQH HQHQQHSAGA SPSSSSVTTS SVKRRRRRRS PGSTSTWGSS APSFPTLPSP ASPRWTHVTS HS

Best Arabidopsis Sequence Match ( AT1G79160.1 )
(BLAST)

001: MILDMAADVS SLVRLLSGYK DDRAVVKDSA GAKSSAALMT RDLLGNGRGG GGDRSLELDL DLQVPTGYEK RLDLKSGKVY LQRCNSTSSS SITNADQTNQ
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI

Arabidopsis Description

Filamentous hemagglutinin transporter [Source:UniProtKB/TrEMBL;Acc:Q84JL6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.