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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76373 Canola nucleus 69.04 69.92
CDX88511 Canola nucleus 69.04 69.92
CDY37016 Canola nucleus 69.04 69.92
Bra035096.1-P Field mustard nucleus 66.11 67.81
VIT_19s0085g00030.t01 Wine grape cytosol 54.81 60.93
AT1G16500.1 Thale cress cytosol 63.18 58.3
CDX79304 Canola cytosol 51.88 54.87
Solyc07g066570.2.1 Tomato cytosol 42.68 53.68
PGSC0003DMT400056874 Potato cytosol 47.7 51.82
KRH13717 Soybean nucleus 51.05 48.61
Os04t0617700-01 Rice cytosol, plasma membrane, plastid 10.46 40.98
GSMUA_AchrUn_... Banana cytosol 33.47 38.28
GSMUA_Achr7P03500_001 Banana cytosol 33.47 37.38
TraesCS2D01G459600.1 Wheat cytosol 34.73 37.22
GSMUA_Achr1P25720_001 Banana cytosol 33.05 36.92
Zm00001d002301_P001 Maize cytosol, nucleus, plastid 32.64 36.11
TraesCS2B01G480800.1 Wheat cytosol 33.05 35.59
GSMUA_Achr9P30650_001 Banana cytosol 33.47 35.56
TraesCS2D01G459700.1 Wheat cytosol 30.13 34.62
TraesCS2A01G459300.1 Wheat cytosol 32.22 34.53
HORVU2Hr1G104270.1 Barley cytosol 25.52 34.46
TraesCS2B01G480900.1 Wheat cytosol 29.71 34.3
GSMUA_Achr11P... Banana cytosol 34.31 34.02
TraesCS2D01G459800.1 Wheat nucleus 31.38 33.94
TraesCS2A01G459400.1 Wheat cytosol 29.71 33.49
TraesCS2B01G481200.1 Wheat cytosol 30.54 33.03
TraesCS2B01G481300.1 Wheat cytosol 30.54 33.03
TraesCS2A01G459500.1 Wheat cytosol 30.96 32.03
HORVU2Hr1G104300.1 Barley cytosol, nucleus 33.89 31.89
OQU82335 Sorghum plastid 33.47 28.07
Zm00001d013614_P001 Maize cytosol 8.79 27.27
Os03t0660700-01 Rice nucleus 21.76 27.08
Zm00001d013615_P001 Maize cytosol 25.94 27.07
EER91121 Sorghum cytosol 27.2 26.97
HORVU0Hr1G005480.2 Barley cytosol 23.43 26.54
Zm00001d033459_P001 Maize cytosol 25.1 26.43
TraesCS4D01G015300.1 Wheat cytosol 25.1 26.2
TraesCS4A01G296700.1 Wheat nucleus 25.1 26.09
TraesCS4B01G017000.1 Wheat nucleus 24.27 26.01
HORVU4Hr1G002540.1 Barley plastid 23.85 17.01
Protein Annotations
MapMan:35.2EntrezGene:844257ProteinID:AEE36210.1ArrayExpress:AT1G79160EnsemblPlantsGene:AT1G79160RefSeq:AT1G79160
TAIR:AT1G79160RefSeq:AT1G79160-TAIR-GEnsemblPlants:AT1G79160.1TAIR:AT1G79160.1EMBL:BT003820EMBL:BT004946
GO:GO:0003674GO:GO:0005575GO:GO:0008150RefSeq:NP_178037.2PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR33177PANTHER:PTHR33177:SF6
UniProt:Q84JL6UniParc:UPI000000C185SEG:seg:::
Description
Filamentous hemagglutinin transporter [Source:UniProtKB/TrEMBL;Acc:Q84JL6]
Coordinates
chr1:-:29779517..29780876
Molecular Weight (calculated)
26051.2 Da
IEP (calculated)
8.351
GRAVY (calculated)
-0.426
Length
239 amino acids
Sequence
(BLAST)
001: MILDMAADVS SLVRLLSGYK DDRAVVKDSA GAKSSAALMT RDLLGNGRGG GGDRSLELDL DLQVPTGYEK RLDLKSGKVY LQRCNSTSSS SITNADQTNQ
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.