Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX76373 | Canola | nucleus | 69.04 | 69.92 |
CDX88511 | Canola | nucleus | 69.04 | 69.92 |
CDY37016 | Canola | nucleus | 69.04 | 69.92 |
Bra035096.1-P | Field mustard | nucleus | 66.11 | 67.81 |
VIT_19s0085g00030.t01 | Wine grape | cytosol | 54.81 | 60.93 |
AT1G16500.1 | Thale cress | cytosol | 63.18 | 58.3 |
CDX79304 | Canola | cytosol | 51.88 | 54.87 |
Solyc07g066570.2.1 | Tomato | cytosol | 42.68 | 53.68 |
PGSC0003DMT400056874 | Potato | cytosol | 47.7 | 51.82 |
KRH13717 | Soybean | nucleus | 51.05 | 48.61 |
Os04t0617700-01 | Rice | cytosol, plasma membrane, plastid | 10.46 | 40.98 |
GSMUA_AchrUn_... | Banana | cytosol | 33.47 | 38.28 |
GSMUA_Achr7P03500_001 | Banana | cytosol | 33.47 | 37.38 |
TraesCS2D01G459600.1 | Wheat | cytosol | 34.73 | 37.22 |
GSMUA_Achr1P25720_001 | Banana | cytosol | 33.05 | 36.92 |
Zm00001d002301_P001 | Maize | cytosol, nucleus, plastid | 32.64 | 36.11 |
TraesCS2B01G480800.1 | Wheat | cytosol | 33.05 | 35.59 |
GSMUA_Achr9P30650_001 | Banana | cytosol | 33.47 | 35.56 |
TraesCS2D01G459700.1 | Wheat | cytosol | 30.13 | 34.62 |
TraesCS2A01G459300.1 | Wheat | cytosol | 32.22 | 34.53 |
HORVU2Hr1G104270.1 | Barley | cytosol | 25.52 | 34.46 |
TraesCS2B01G480900.1 | Wheat | cytosol | 29.71 | 34.3 |
GSMUA_Achr11P... | Banana | cytosol | 34.31 | 34.02 |
TraesCS2D01G459800.1 | Wheat | nucleus | 31.38 | 33.94 |
TraesCS2A01G459400.1 | Wheat | cytosol | 29.71 | 33.49 |
TraesCS2B01G481200.1 | Wheat | cytosol | 30.54 | 33.03 |
TraesCS2B01G481300.1 | Wheat | cytosol | 30.54 | 33.03 |
TraesCS2A01G459500.1 | Wheat | cytosol | 30.96 | 32.03 |
HORVU2Hr1G104300.1 | Barley | cytosol, nucleus | 33.89 | 31.89 |
OQU82335 | Sorghum | plastid | 33.47 | 28.07 |
Zm00001d013614_P001 | Maize | cytosol | 8.79 | 27.27 |
Os03t0660700-01 | Rice | nucleus | 21.76 | 27.08 |
Zm00001d013615_P001 | Maize | cytosol | 25.94 | 27.07 |
EER91121 | Sorghum | cytosol | 27.2 | 26.97 |
HORVU0Hr1G005480.2 | Barley | cytosol | 23.43 | 26.54 |
Zm00001d033459_P001 | Maize | cytosol | 25.1 | 26.43 |
TraesCS4D01G015300.1 | Wheat | cytosol | 25.1 | 26.2 |
TraesCS4A01G296700.1 | Wheat | nucleus | 25.1 | 26.09 |
TraesCS4B01G017000.1 | Wheat | nucleus | 24.27 | 26.01 |
HORVU4Hr1G002540.1 | Barley | plastid | 23.85 | 17.01 |
Protein Annotations
MapMan:35.2 | EntrezGene:844257 | ProteinID:AEE36210.1 | ArrayExpress:AT1G79160 | EnsemblPlantsGene:AT1G79160 | RefSeq:AT1G79160 |
TAIR:AT1G79160 | RefSeq:AT1G79160-TAIR-G | EnsemblPlants:AT1G79160.1 | TAIR:AT1G79160.1 | EMBL:BT003820 | EMBL:BT004946 |
GO:GO:0003674 | GO:GO:0005575 | GO:GO:0008150 | RefSeq:NP_178037.2 | PO:PO:0000013 | PO:PO:0000037 |
PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF6 |
UniProt:Q84JL6 | UniParc:UPI000000C185 | SEG:seg | : | : | : |
Description
Filamentous hemagglutinin transporter [Source:UniProtKB/TrEMBL;Acc:Q84JL6]
Coordinates
chr1:-:29779517..29780876
Molecular Weight (calculated)
26051.2 Da
IEP (calculated)
8.351
GRAVY (calculated)
-0.426
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MILDMAADVS SLVRLLSGYK DDRAVVKDSA GAKSSAALMT RDLLGNGRGG GGDRSLELDL DLQVPTGYEK RLDLKSGKVY LQRCNSTSSS SITNADQTNQ
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.