Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51001 | Canola | nucleus | 62.93 | 66.8 |
| Bra026046.1-P | Field mustard | cytosol, nucleus, plastid | 62.93 | 66.53 |
| CDX81765 | Canola | cytosol | 61.39 | 65.98 |
| Bra026718.1-P | Field mustard | nucleus | 61.0 | 65.29 |
| CDY68470 | Canola | cytosol, nucleus, plastid | 60.62 | 64.08 |
| CDY55881 | Canola | cytosol, nucleus, plastid | 59.85 | 63.27 |
| AT1G79160.1 | Thale cress | cytosol | 58.3 | 63.18 |
| VIT_19s0085g00030.t01 | Wine grape | cytosol | 47.88 | 57.67 |
| Solyc07g066570.2.1 | Tomato | cytosol | 40.15 | 54.74 |
| PGSC0003DMT400056874 | Potato | cytosol | 44.02 | 51.82 |
| KRH13717 | Soybean | nucleus | 45.56 | 47.01 |
| Os04t0617700-01 | Rice | cytosol, plasma membrane, plastid | 9.65 | 40.98 |
| TraesCS2D01G459600.1 | Wheat | cytosol | 32.82 | 38.12 |
| Zm00001d002301_P001 | Maize | cytosol, nucleus, plastid | 31.27 | 37.5 |
| TraesCS2B01G480800.1 | Wheat | cytosol | 31.66 | 36.94 |
| TraesCS2D01G459700.1 | Wheat | cytosol | 29.34 | 36.54 |
| GSMUA_Achr7P03500_001 | Banana | cytosol | 30.12 | 36.45 |
| TraesCS2A01G459300.1 | Wheat | cytosol | 31.27 | 36.32 |
| TraesCS2B01G480900.1 | Wheat | cytosol | 28.96 | 36.23 |
| HORVU2Hr1G104270.1 | Barley | cytosol | 24.71 | 36.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.96 | 35.89 |
| TraesCS2D01G459800.1 | Wheat | nucleus | 30.12 | 35.29 |
| TraesCS2B01G481200.1 | Wheat | cytosol | 30.12 | 35.29 |
| GSMUA_Achr1P25720_001 | Banana | cytosol | 28.96 | 35.05 |
| TraesCS2B01G481300.1 | Wheat | cytosol | 29.73 | 34.84 |
| TraesCS2A01G459500.1 | Wheat | cytosol | 30.89 | 34.63 |
| TraesCS2A01G459400.1 | Wheat | cytosol | 27.03 | 33.02 |
| GSMUA_Achr9P30650_001 | Banana | cytosol | 28.57 | 32.89 |
| HORVU2Hr1G104300.1 | Barley | cytosol, nucleus | 31.66 | 32.28 |
| GSMUA_Achr11P... | Banana | cytosol | 28.57 | 30.71 |
| Zm00001d013615_P001 | Maize | cytosol | 26.64 | 30.13 |
| Zm00001d013614_P001 | Maize | cytosol | 8.88 | 29.87 |
| Zm00001d033459_P001 | Maize | cytosol | 25.48 | 29.07 |
| OQU82335 | Sorghum | plastid | 30.89 | 28.07 |
| HORVU0Hr1G005480.2 | Barley | cytosol | 22.78 | 27.96 |
| TraesCS4D01G015300.1 | Wheat | cytosol | 24.71 | 27.95 |
| TraesCS4B01G017000.1 | Wheat | nucleus | 23.55 | 27.35 |
| EER91121 | Sorghum | cytosol | 25.1 | 26.97 |
| TraesCS4A01G296700.1 | Wheat | nucleus | 23.94 | 26.96 |
| Os03t0660700-01 | Rice | nucleus | 19.69 | 26.56 |
| HORVU4Hr1G002540.1 | Barley | plastid | 23.55 | 18.21 |
Protein Annotations
| MapMan:35.2 | EntrezGene:838220 | ProteinID:AAD34701.1 | ProteinID:AEE29462.1 | ArrayExpress:AT1G16500 | EnsemblPlantsGene:AT1G16500 |
| RefSeq:AT1G16500 | TAIR:AT1G16500 | RefSeq:AT1G16500-TAIR-G | EnsemblPlants:AT1G16500.1 | TAIR:AT1G16500.1 | EMBL:AY084506 |
| EMBL:AY140027 | EMBL:BT006296 | GO:GO:0008150 | RefSeq:NP_563999.1 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF6 |
| UniProt:Q9SA48 | UniParc:UPI000005EB54 | SEG:seg | : | : | : |
Description
>F3O9.30 [Source:UniProtKB/TrEMBL;Acc:Q9SA48]
Coordinates
chr1:+:5638779..5640202
Molecular Weight (calculated)
28027.1 Da
IEP (calculated)
6.928
GRAVY (calculated)
-0.434
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADVSSLVR ILSRFKDDRT VVKDSTGPRS TVALMTRDLL GIGGCVGGGG GGDEQSLELD LDVQVPNGWE KRLDLKSGKV YLQQQCNSTS SSSSSHHHHH
101: HHEDQTNQTV PRFQDLNVPP ISDKFPAKPL LSLFDDDDDT SLELKLVPSS ISRPLPPPLS SFSPNQSLSY LSSVCTLDKV KLALERAEKD TKKRQSPEDD
201: GVYDGTASAT VAASQVAAGC PGCLSYVFVA KNNPKCPRCH SFVPLPAMKK PKIDLNISM
101: HHEDQTNQTV PRFQDLNVPP ISDKFPAKPL LSLFDDDDDT SLELKLVPSS ISRPLPPPLS SFSPNQSLSY LSSVCTLDKV KLALERAEKD TKKRQSPEDD
201: GVYDGTASAT VAASQVAAGC PGCLSYVFVA KNNPKCPRCH SFVPLPAMKK PKIDLNISM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.