Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 56.54 | 57.89 |
| GSMUA_Achr7P03500_001 | Banana | cytosol | 54.67 | 54.67 |
| GSMUA_Achr9P30650_001 | Banana | cytosol | 47.66 | 45.33 |
| GSMUA_Achr11P... | Banana | cytosol | 50.93 | 45.23 |
| Solyc07g066570.2.1 | Tomato | cytosol | 37.85 | 42.63 |
| Os04t0617700-01 | Rice | cytosol, plasma membrane, plastid | 12.15 | 42.62 |
| Zm00001d002301_P001 | Maize | cytosol, nucleus, plastid | 42.06 | 41.67 |
| TraesCS2B01G480800.1 | Wheat | cytosol | 41.12 | 39.64 |
| PGSC0003DMT400056874 | Potato | cytosol | 40.19 | 39.09 |
| TraesCS2D01G459600.1 | Wheat | cytosol | 40.65 | 39.01 |
| TraesCS2A01G459300.1 | Wheat | cytosol | 40.19 | 38.56 |
| TraesCS2D01G459800.1 | Wheat | nucleus | 38.78 | 37.56 |
| TraesCS2B01G481300.1 | Wheat | cytosol | 38.32 | 37.1 |
| TraesCS2B01G481200.1 | Wheat | cytosol | 38.32 | 37.1 |
| HORVU2Hr1G104270.1 | Barley | cytosol | 30.37 | 36.72 |
| VIT_10s0092g00640.t01 | Wine grape | cytosol | 37.38 | 36.36 |
| TraesCS2A01G459500.1 | Wheat | cytosol | 38.78 | 35.93 |
| KRH13717 | Soybean | nucleus | 42.06 | 35.86 |
| VIT_19s0085g00030.t01 | Wine grape | cytosol | 35.98 | 35.81 |
| HORVU2Hr1G104300.1 | Barley | cytosol, nucleus | 41.59 | 35.04 |
| Bra035096.1-P | Field mustard | nucleus | 37.85 | 34.76 |
| TraesCS2D01G459700.1 | Wheat | cytosol | 33.64 | 34.62 |
| TraesCS2B01G480900.1 | Wheat | cytosol | 33.18 | 34.3 |
| TraesCS2A01G459400.1 | Wheat | cytosol | 33.64 | 33.96 |
| Zm00001d033459_P001 | Maize | cytosol | 35.51 | 33.48 |
| CDY37016 | Canola | nucleus | 36.92 | 33.47 |
| CDX88511 | Canola | nucleus | 36.92 | 33.47 |
| CDX76373 | Canola | nucleus | 36.92 | 33.47 |
| Zm00001d013615_P001 | Maize | cytosol | 35.51 | 33.19 |
| AT1G79160.1 | Thale cress | cytosol | 36.92 | 33.05 |
| EER91121 | Sorghum | cytosol | 35.51 | 31.54 |
| TraesCS4B01G017000.1 | Wheat | nucleus | 32.71 | 31.39 |
| Zm00001d013614_P001 | Maize | cytosol | 11.21 | 31.17 |
| CDY55881 | Canola | cytosol, nucleus, plastid | 35.51 | 31.02 |
| TraesCS4D01G015300.1 | Wheat | cytosol | 33.18 | 31.0 |
| CDX79304 | Canola | cytosol | 32.71 | 30.97 |
| HORVU0Hr1G005480.2 | Barley | cytosol | 30.37 | 30.81 |
| Bra026046.1-P | Field mustard | cytosol, nucleus, plastid | 35.05 | 30.61 |
| Bra026718.1-P | Field mustard | nucleus | 34.58 | 30.58 |
| TraesCS4A01G296700.1 | Wheat | nucleus | 32.71 | 30.43 |
| CDY51001 | Canola | nucleus | 34.58 | 30.33 |
| CDX81765 | Canola | cytosol | 34.11 | 30.29 |
| CDY68470 | Canola | cytosol, nucleus, plastid | 34.58 | 30.2 |
| OQU82335 | Sorghum | plastid | 39.25 | 29.47 |
| AT1G16500.1 | Thale cress | cytosol | 35.05 | 28.96 |
| Os03t0660700-01 | Rice | nucleus | 22.43 | 25.0 |
| HORVU4Hr1G002540.1 | Barley | plastid | 35.05 | 22.39 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P25720_001 | EnsemblPlants:GSMUA_Achr1T25720_001 | EnsemblPlantsGene:GSMUA_Achr1G25720_001 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF6 | SEG:seg |
| UniParc:UPI0002966010 | UniProt:M0S329 | MapMan:35.2 | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G25720_001]
Coordinates
chr1:+:20047521..20048504
Molecular Weight (calculated)
23222.5 Da
IEP (calculated)
5.089
GRAVY (calculated)
-0.321
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEVSSLAR MLTGYGEEGE GQREQELVTR DLLGGAAEVD LDLQVPAGWE RHLDLSTGKT YIQKRESEPA PRLLHDLNLP PPSPSVGQKL EYQSVCTLEK
101: VKSALERESR LLPRPDASPS PPPSSSSASS SASASFLSRR WTVEQAQDGV ASTGPATMMA MAVAVCPACL LYVLVSEVDP RCPRCTAHVP VNVPHKKPWI
201: DLNFSLHADN CDLY
101: VKSALERESR LLPRPDASPS PPPSSSSASS SASASFLSRR WTVEQAQDGV ASTGPATMMA MAVAVCPACL LYVLVSEVDP RCPRCTAHVP VNVPHKKPWI
201: DLNFSLHADN CDLY
001: MILDMAADVS SLVRLLSGYK DDRAVVKDSA GAKSSAALMT RDLLGNGRGG GGDRSLELDL DLQVPTGYEK RLDLKSGKVY LQRCNSTSSS SITNADQTNQ
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI
Arabidopsis Description
Filamentous hemagglutinin transporter [Source:UniProtKB/TrEMBL;Acc:Q84JL6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.