Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76373 | Canola | nucleus | 90.99 | 89.83 |
| CDX88511 | Canola | nucleus | 90.99 | 89.83 |
| CDY37016 | Canola | nucleus | 90.99 | 89.83 |
| AT1G79160.1 | Thale cress | cytosol | 67.81 | 66.11 |
| VIT_19s0085g00030.t01 | Wine grape | cytosol | 55.79 | 60.47 |
| Bra026718.1-P | Field mustard | nucleus | 57.08 | 54.96 |
| Bra026046.1-P | Field mustard | cytosol, nucleus, plastid | 56.65 | 53.88 |
| Solyc07g066570.2.1 | Tomato | cytosol | 42.92 | 52.63 |
| PGSC0003DMT400056874 | Potato | cytosol | 47.64 | 50.45 |
| KRH13717 | Soybean | nucleus | 51.93 | 48.21 |
| Os04t0617700-01 | Rice | cytosol, plasma membrane, plastid | 10.73 | 40.98 |
| GSMUA_Achr7P03500_001 | Banana | cytosol | 36.48 | 39.72 |
| GSMUA_Achr1P25720_001 | Banana | cytosol | 34.76 | 37.85 |
| Zm00001d002301_P001 | Maize | cytosol, nucleus, plastid | 34.33 | 37.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.05 | 36.84 |
| TraesCS2D01G459600.1 | Wheat | cytosol | 33.91 | 35.43 |
| GSMUA_Achr9P30650_001 | Banana | cytosol | 33.48 | 34.67 |
| GSMUA_Achr11P... | Banana | cytosol | 35.19 | 34.02 |
| TraesCS2B01G480800.1 | Wheat | cytosol | 32.19 | 33.78 |
| TraesCS2A01G459300.1 | Wheat | cytosol | 32.19 | 33.63 |
| TraesCS2B01G481200.1 | Wheat | cytosol | 31.33 | 33.03 |
| TraesCS2D01G459800.1 | Wheat | nucleus | 31.33 | 33.03 |
| TraesCS2B01G480900.1 | Wheat | cytosol | 29.18 | 32.85 |
| HORVU2Hr1G104270.1 | Barley | cytosol | 24.89 | 32.77 |
| TraesCS2D01G459700.1 | Wheat | cytosol | 29.18 | 32.69 |
| TraesCS2B01G481300.1 | Wheat | cytosol | 30.9 | 32.58 |
| TraesCS2A01G459400.1 | Wheat | cytosol | 28.76 | 31.6 |
| TraesCS2A01G459500.1 | Wheat | cytosol | 31.33 | 31.6 |
| HORVU2Hr1G104300.1 | Barley | cytosol, nucleus | 32.62 | 29.92 |
| OQU82335 | Sorghum | plastid | 34.33 | 28.07 |
| TraesCS4B01G017000.1 | Wheat | nucleus | 26.61 | 27.8 |
| Zm00001d013614_P001 | Maize | cytosol | 9.01 | 27.27 |
| EER91121 | Sorghum | cytosol | 27.47 | 26.56 |
| TraesCS4D01G015300.1 | Wheat | cytosol | 25.75 | 26.2 |
| TraesCS4A01G296700.1 | Wheat | nucleus | 25.75 | 26.09 |
| Zm00001d033459_P001 | Maize | cytosol | 25.32 | 25.99 |
| Zm00001d013615_P001 | Maize | cytosol | 25.32 | 25.76 |
| HORVU0Hr1G005480.2 | Barley | cytosol | 22.75 | 25.12 |
| Os03t0660700-01 | Rice | nucleus | 18.88 | 22.92 |
| HORVU4Hr1G002540.1 | Barley | plastid | 24.03 | 16.72 |
Protein Annotations
Description
AT1G79160 (E=3e-074) | unknown protein
Coordinates
chrA07:-:22143009..22143805
Molecular Weight (calculated)
25119.7 Da
IEP (calculated)
9.066
GRAVY (calculated)
-0.509
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADVSSLVR LLNGYNDAKE SSGAKSTTAP MTRDLLGSRG GGGGGDRSLE LDLDLQVPTG WEKRLDLKSG KVYLQRCNST SSSSITNADQ SNLTLPTTSS
101: SFQDLNLFPP NPTNSHAKPL LNLFDDTSPE LKLLPPNRNF QSVCTLDKVK SALERAERDP VVLKKRQSPD DRHHHRGAEV ASSSPVAAGC PGCLSYVLVM
201: KNNPRCPRCD TVVSLPTSSS TKKKVKIDLN ISI
101: SFQDLNLFPP NPTNSHAKPL LNLFDDTSPE LKLLPPNRNF QSVCTLDKVK SALERAERDP VVLKKRQSPD DRHHHRGAEV ASSSPVAAGC PGCLSYVLVM
201: KNNPRCPRCD TVVSLPTSSS TKKKVKIDLN ISI
001: MILDMAADVS SLVRLLSGYK DDRAVVKDSA GAKSSAALMT RDLLGNGRGG GGDRSLELDL DLQVPTGYEK RLDLKSGKVY LQRCNSTSSS SITNADQTNQ
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI
101: TVPTFQDLNF PPPTLNNSPL LNLFDDTTPE LKLLPSSRSS RPNTSNLQSV CTLDKVKSAL ERAERDPAMF KKRQSPDDTV YDHYRTEAVA SPVVAGCPGC
201: LSYVLVMMNN PKCPRCDTIV PLPTNPMKKK PKIDLNISI
Arabidopsis Description
Filamentous hemagglutinin transporter [Source:UniProtKB/TrEMBL;Acc:Q84JL6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.