Factsheet for HORVU7Hr1G078500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
peroxisome 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G005480.2
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU0Hr1G040420.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G104270.1
HORVU2Hr1G104300.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G034290.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G002540.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU6Hr1G023630.1
HORVU7Hr1G031130.2
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G22360.1	HORVU0Hr1G005480.2	AT1G16500.1	21798944
AT5G22360.1	HORVU2Hr1G104270.1	AT1G16500.1	21798944
AT5G22360.1	HORVU2Hr1G104300.1	AT1G16500.1	21798944
AT5G22360.1	HORVU4Hr1G002540.1	AT1G16500.1	21798944
AT5G22360.1	HORVU0Hr1G018470.1	AT1G22920.1	21798944
AT5G22360.1	HORVU0Hr1G025410.1	AT1G22920.1	21798944
AT5G22360.1	HORVU1Hr1G008160.1	AT1G22920.1	21798944
AT5G22360.1	HORVU2Hr1G056160.5	AT1G22920.1	21798944
AT5G22360.1	HORVU2Hr1G067660.1	AT1G22920.1	21798944
AT5G22360.1	HORVU2Hr1G112000.1	AT1G22920.1	21798944
AT5G22360.1	HORVU3Hr1G021300.1	AT1G22920.1	21798944
AT5G22360.1	HORVU3Hr1G054660.1	AT1G22920.1	21798944
AT5G22360.1	HORVU3Hr1G113750.1	AT1G22920.1	21798944
AT5G22360.1	HORVU4Hr1G047410.2	AT1G22920.1	21798944
AT5G22360.1	HORVU4Hr1G048730.1	AT1G22920.1	21798944
AT5G22360.1	HORVU6Hr1G023630.1	AT1G22920.1	21798944
AT5G22360.1	HORVU7Hr1G078010.1	AT1G22920.1	21798944
AT5G22360.1	HORVU0Hr1G040420.1	AT2G24100.1	21798944
AT5G22360.1	HORVU3Hr1G034290.1	AT2G24100.1	21798944
AT5G22360.1	HORVU7Hr1G031130.2	AT2G24100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G228700.1	Wheat	plasma membrane	99.55	99.55
TraesCS7A01G328000.1	Wheat	plasma membrane	99.55	99.55
TraesCS7D01G324800.1	Wheat	plasma membrane	99.1	99.1
Zm00001d052756_P001	Maize	endoplasmic reticulum	81.53	93.78
EES13179	Sorghum	endoplasmic reticulum, plasma membrane	92.34	92.34
Os10t0154000-01	Rice	plasma membrane	92.34	90.71
GSMUA_Achr11P...	Banana	endoplasmic reticulum	84.23	85.78
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	83.33	84.86
VIT_06s0080g00800.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.43	83.18
KRH25265	Soybean	plasma membrane	81.08	81.82
KRH30399	Soybean	endoplasmic reticulum	81.08	81.82
Bra020187.1-P	Field mustard	endoplasmic reticulum	81.08	81.45
CDY09133	Canola	endoplasmic reticulum	81.08	81.45
AT5G22360.1	Thale cress	plasma membrane	80.63	81.0
CDX88799	Canola	plasma membrane	80.18	80.54
Bra006623.1-P	Field mustard	endoplasmic reticulum, plasma membrane	79.73	80.09
CDX70999	Canola	endoplasmic reticulum	79.73	80.09
PGSC0003DMT400015063	Potato	plastid	74.77	72.81
Solyc06g074250.2.1	Tomato	endoplasmic reticulum, plasma membrane	81.08	68.97
HORVU7Hr1G028250.1	Barley	peroxisome, plasma membrane	53.15	47.97
HORVU5Hr1G107510.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.59	35.43

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	EMBL:AK370059	ncoils:Coil	UniProt:F2E1N8
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810
GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	EnsemblPlantsGene:HORVU7Hr1G078500	EnsemblPlants:HORVU7Hr1G078500.1	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf
InterPro:Longin_dom	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859
PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF165	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356
SignalP:SignalP-noTM	InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI0002007704	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E1N8]

Coordinates

chrchr7H:-:460866409..460868613

Molecular Weight (calculated)

24953.7 Da

IEP (calculated)

9.697

GRAVY (calculated)

0.191

Length

222 amino acids

Sequence
(BLAST)

001: MAIVYALVAR GTVVLAEFAA VSGNAGAVAR RILEKLPSEA EARLCFAQDR YIFHVLRSPA DGLTFLCMAN DTFGRRVPFI YLEDIQMRFM KNYGRVAHSA
101: LAYAMNDEFA RVLHQQMEFF SSNPSADTLN RLRGEVSEIH TVMVDNIDKI LDRGDRISLL VDKTSTMQDS GFHFRKQSKR LRRALWMKNV KLLAVLTAVI
201: VLLLYLIIAA FCGGLSLPSC RS

Best Arabidopsis Sequence Match ( AT5G22360.1 )
(BLAST)

001: MAIVYAVVAR GTVVLAEFSA VTGNTGAVVR RILEKLSPEI SDERLCFSQD RYIFHILRSD GLTFLCMAND TFGRRVPFSY LEEIHMRFMK NYGKVAHNAP
101: AYAMNDEFSR VLHQQMEFFS SNPSVDTLNR VRGEVSEIRS VMVENIEKIM ERGDRIELLV DKTATMQDSS FHFRKQSKRL RRALWMKNAK LLVLLTCLIV
201: FLLYIIIASF CGGITLPSCR S

Arabidopsis Description

VAMP714Vesicle-associated membrane protein 714 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMR5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.