CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0639800-00	Rice	plasma membrane	75.98	79.45
TraesCS5D01G003800.1	Wheat	cytosol	75.55	74.89
TraesCS5A01G003100.1	Wheat	cytosol	73.36	72.41
EER96027	Sorghum	extracellular	65.5	67.57
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.19	66.82
KXG40114	Sorghum	cytosol, vacuole	55.02	57.27
KXG25383	Sorghum	plastid	51.97	49.38
KXG34786	Sorghum	cytosol	51.09	46.99
EES09956	Sorghum	cytosol, mitochondrion, nucleus, plastid	14.85	40.96
OQU75937	Sorghum	plasma membrane	36.24	37.56
EES13179	Sorghum	endoplasmic reticulum, plasma membrane	33.19	34.23
EES05972	Sorghum	cytosol	33.62	33.77

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	UniProt:A0A1B6PEM2	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:IPR001388
InterPro:IPR010908	EnsemblPlants:KXG24150	ProteinID:KXG24150	ProteinID:KXG24150.1	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF99	SMART:SM01270	EnsemblPlantsGene:SORBI_3008G191600	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin
TMHMM:TMhelix	UniParc:UPI00081AE0FC	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:62532758..62535982

Molecular Weight (calculated)

25344.8 Da

IEP (calculated)

8.789

GRAVY (calculated)

-0.143

Length

229 amino acids

Sequence
(BLAST)

001: MAQPPERAAA GAGALIYAMV ARGTVAVAEH TSYTGNFRDI AAQCLLKLPA GNNRFTYTCD GHTFNFLVSD GYAFCVVATE SAGRQIPMAF LEMIKEDFNK
101: RYAGGKAATA TANSLTRDFG PRLRDQMQYC TDHPEEVSKL SKVKAQMDQV KSIMMENIDK VIDRGQQVDE LVTRTEQLHD GAADFRRGGE RLRRKMWYQN
201: MKMKLIVLGI IVALIVIIIL SICHGGCGK

Best Arabidopsis Sequence Match ( AT1G04760.2 )
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT

Arabidopsis Description

VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.