Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G32150.1 | EES02705 | AT5G46860.1 | 24556609 |
| AT4G32150.1 | EES05663 | AT5G46860.1 | 24556609 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0174400-01 | Rice | plasma membrane | 93.21 | 93.21 |
| TraesCS7B01G037300.1 | Wheat | plasma membrane, plastid | 90.5 | 90.5 |
| TraesCS7A01G136300.1 | Wheat | plasma membrane, plastid | 90.5 | 90.5 |
| TraesCS7D01G136300.1 | Wheat | endoplasmic reticulum, plasma membrane | 90.05 | 90.05 |
| Zm00001d037483_P002 | Maize | plasma membrane | 98.19 | 85.43 |
| HORVU7Hr1G028250.1 | Barley | peroxisome, plasma membrane | 89.59 | 80.49 |
| GSMUA_Achr6P35140_001 | Banana | plasma membrane | 80.09 | 80.45 |
| GSMUA_Achr9P09180_001 | Banana | endoplasmic reticulum, plasma membrane | 79.64 | 80.0 |
| EES05972 | Sorghum | cytosol | 82.35 | 79.82 |
| AT4G32150.1 | Thale cress | golgi, plasma membrane | 76.02 | 76.71 |
| CDY61387 | Canola | endoplasmic reticulum, plasma membrane | 76.02 | 76.71 |
| Bra040067.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 76.02 | 76.71 |
| Solyc06g065950.2.1 | Tomato | endoplasmic reticulum, nucleus | 76.02 | 76.36 |
| VIT_04s0008g05650.t01 | Wine grape | extracellular | 75.57 | 75.91 |
| PGSC0003DMT400067225 | Potato | mitochondrion | 75.57 | 75.91 |
| KRH73537 | Soybean | endoplasmic reticulum | 74.21 | 74.89 |
| CDX75224 | Canola | endoplasmic reticulum, plasma membrane | 74.21 | 74.55 |
| KRH14588 | Soybean | endoplasmic reticulum | 73.76 | 74.43 |
| CDX68821 | Canola | endoplasmic reticulum, plasma membrane | 73.76 | 74.09 |
| AT2G25340.1 | Thale cress | endoplasmic reticulum, plasma membrane | 72.4 | 73.06 |
| CDX69781 | Canola | plasma membrane | 71.95 | 71.95 |
| CDX97084 | Canola | plasma membrane | 71.04 | 71.04 |
| Bra008987.1-P | Field mustard | mitochondrion | 70.59 | 70.59 |
| AT5G11150.2 | Thale cress | golgi, plasma membrane | 69.23 | 67.7 |
| KRH03646 | Soybean | plasma membrane | 65.16 | 64.0 |
| KRH20159 | Soybean | plastid | 64.25 | 63.39 |
| EES13179 | Sorghum | endoplasmic reticulum, plasma membrane | 55.2 | 54.95 |
| Bra011325.1-P | Field mustard | endoplasmic reticulum | 67.87 | 41.1 |
| EER96027 | Sorghum | extracellular | 38.91 | 38.74 |
| OQU90815 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.56 | 37.73 |
| KXG24150 | Sorghum | cytosol | 37.56 | 36.24 |
| KXG40114 | Sorghum | cytosol, vacuole | 34.84 | 35.0 |
| KXG34786 | Sorghum | cytosol | 36.2 | 32.13 |
| KXG25383 | Sorghum | plastid | 33.94 | 31.12 |
| EES09956 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 10.41 | 27.71 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:22.7.5.1 | Gene3D:3.30.450.50 | EntrezGene:8076176 | UniProt:C5Z5C0 | ProteinID:EER89300.1 |
| GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0006906 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 |
| GO:GO:0031201 | InterPro:IPR001388 | InterPro:IPR010908 | InterPro:Longin-like_dom_sf | InterPro:Longin_dom | ProteinID:OQU75936.1 |
| EnsemblPlants:OQU75937 | ProteinID:OQU75937 | ProteinID:OQU75937.1 | PFAM:PF00957 | PFAM:PF13774 | PRINTS:PR00219 |
| ScanProsite:PS00417 | PFscan:PS50859 | PFscan:PS50892 | PANTHER:PTHR21136 | PANTHER:PTHR21136:SF104 | SMART:SM01270 |
| EnsemblPlantsGene:SORBI_3010G058500 | SUPFAM:SSF58038 | SUPFAM:SSF64356 | unigene:Sbi.8049 | SignalP:SignalP-noTM | InterPro:Synaptobrevin |
| TMHMM:TMhelix | UniParc:UPI0001A896DA | RefSeq:XP_002437933.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:4595288..4598958
Molecular Weight (calculated)
24988.3 Da
IEP (calculated)
9.790
GRAVY (calculated)
-0.046
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MAILYALVAR GTVVLAEHSA AATNAGAIAR QVLERLPDGG ADSHVSYTQD RYVFHAKRTD GITALCMADD SAGRRIPFAF LEDIHGRFVK TYGRAALTAL
101: AYAMNDEFSR VLSQQMDYYS NDPNADRINR MRGEINQVRS VMIDNIDKVL ERGDRLELLV DKTANMQGNT VRFKRQARRF RNTTWWRNVK LTAALILLLL
201: VIIYVVLVFM CHGFTLPTCI R
101: AYAMNDEFSR VLSQQMDYYS NDPNADRINR MRGEINQVRS VMIDNIDKVL ERGDRLELLV DKTANMQGNT VRFKRQARRF RNTTWWRNVK LTAALILLLL
201: VIIYVVLVFM CHGFTLPTCI R
001: MAILYALVAR GTVVLSEFTA TSTNASTIAK QILEKVPGDN DSNVSYSQDR YVFHVKRTDG LTVLCMAEET AGRRIPFAFL EDIHQRFVRT YGRAVHTALA
101: YAMNEEFSRV LSQQIDYYSN DPNADRINRI KGEMNQVRGV MIENIDKVLD RGERLELLVD KTANMQGNTF RFRKQARRFR SNVWWRNCKL TVLLILLLLV
201: IIYIAVAFLC HGPTLPSCI
101: YAMNEEFSRV LSQQIDYYSN DPNADRINRI KGEMNQVRGV MIENIDKVLD RGERLELLVD KTANMQGNTF RFRKQARRFR SNVWWRNCKL TVLLILLLLV
201: IIYIAVAFLC HGPTLPSCI
Arabidopsis Description
VAMP711Vesicle-associated membrane protein 711 [Source:UniProtKB/Swiss-Prot;Acc:O49377]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.