Factsheet for Zm00001d034505_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007767_P001	Maize	extracellular	60.7	77.93
Zm00001d053132_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	34.74	73.88
CDY48527	Canola	cytosol	18.6	73.61
Zm00001d013055_P002	Maize	extracellular, plasma membrane	56.84	68.64
Zm00001d019091_P002	Maize	vacuole	60.7	66.28
Zm00001d027808_P001	Maize	cytosol, mitochondrion	45.26	58.37
Zm00001d031942_P003	Maize	plastid	39.3	46.47
Zm00001d005468_P001	Maize	cytosol	39.65	44.66
Zm00001d019298_P002	Maize	cytosol	38.25	43.08
Zm00001d048443_P002	Maize	peroxisome	44.91	41.29
Zm00001d052756_P001	Maize	endoplasmic reticulum	22.46	33.16
Zm00001d018408_P001	Maize	cytosol	23.51	29.65
Zm00001d037483_P002	Maize	plasma membrane	24.91	27.95

Protein Annotations

EntrezGene:100282952	MapMan:22.7.5.1	Gene3D:3.30.450.50	UniProt:A0A1D6L850	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:IPR001388	InterPro:IPR010908
InterPro:Longin-like_dom_sf	InterPro:Longin_dom	ProteinID:ONM10427.1	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219
ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF120	SMART:SM01270
SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	UniParc:UPI000844E667	EnsemblPlantsGene:Zm00001d034505	EnsemblPlants:Zm00001d034505_P001
EnsemblPlants:Zm00001d034505_T001	:	:	:	:	:

Description

Vesicle-associated membrane protein 722

Coordinates

chr1:+:294871168..294874738

Molecular Weight (calculated)

32185.3 Da

IEP (calculated)

6.592

GRAVY (calculated)

-0.372

Length

285 amino acids

Sequence
(BLAST)

001: MGQQSLIYAF VARGTVILAE YTEFTGNFTT IASQCLMKLP ASNNKFTYNC DGHTFNYLVE DGFSMAMPDC GHLCVDLADL VDMRLAYCVV AVESVGQQIP
101: IAFMDRVKED FTKRYGGGKA ATAAANSLNR EFGSKLKEHM QYCVDHPEEV SKLAKVKAQV SEVKGVMMEN IEKVLDRGEK IELLVDKTEN LRSQEGRLVS
201: LDVRISVGTR FQTAGNKCQE KDVVTEHENQ AHRPGNNHRT HSDHYPLCLS WFQMPLSTDQ NTDTFNCTYY TAAWSKKKYD LLLFR

Best Arabidopsis Sequence Match ( AT1G04750.1 )
(BLAST)

001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE DGFTYCVVAV DSAGRQIPMS FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC

Arabidopsis Description

VAMP721Putative vesicle-associated membrane protein, synaptobrevin 7B [Source:UniProtKB/TrEMBL;Acc:Q681L9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.