Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G163600.3 | Wheat | nucleus | 91.34 | 91.34 |
| TraesCS5B01G160900.1 | Wheat | nucleus | 90.4 | 90.74 |
| Os09t0128400-01 | Rice | nucleus | 34.09 | 81.9 |
| HORVU5Hr1G050970.2 | Barley | nucleus | 81.73 | 81.27 |
| TraesCS7D01G153200.1 | Wheat | nucleus | 40.49 | 40.34 |
| TraesCS5D01G505800.1 | Wheat | cytosol | 24.86 | 30.84 |
| TraesCS6D01G337100.2 | Wheat | mitochondrion | 29.19 | 30.75 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G168600.1 | EnsemblPlantsGene:TraesCS5D01G168600 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF1 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr5D:-:264369027..264373132
Molecular Weight (calculated)
58724.9 Da
IEP (calculated)
6.473
GRAVY (calculated)
-0.609
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHLPHMGKL RRGVKEEAVD DDGGAAGAAG AEASPFHKRS RLAQQQQPQQ WSTGGASVSN QQSTQHDFLE EPSPLGLRLK KSPSLVDLIQ MKLVQAGKAK
101: DAQHGGTASA SEKLKASNFP GSVLRIGSWE WVSRYEGDLV VKCYFAKHKL VWEVLDGGLK SKIEIQWSDI CALKVVCPET EPGTLEIALS RQPLFFRETN
201: PQPRKHTLWQ ATSDFTAGQA SRHRRHFLQC APGMMNKHVE KLVHCDPRLC SLSQQNDITL ENPYFESRSS IFEDPDDVKC QNFVHNKDDD DQLTPQRFRE
301: LLQHHSASGR IDAEERQEAG TSDGLARDFS NSVADGQVIK QDDGSSVGEP HTSILLSWNG FKLPGIQRSM SKSEIANHIG HHIYRHMYSG DLPAADGGAG
401: TSGKLAIDDI TRYLLNDSQI LDSGNDSTGK LAFDEMTRQL LNDSQITIAA DERMLMSRVN SLCSLIHRDS CTGQVNPGVH SDNNEIYERK PQAYAPPVEG
501: DSGNGSLPPR QEPFGDLLTH LPRISSFPHF L
101: DAQHGGTASA SEKLKASNFP GSVLRIGSWE WVSRYEGDLV VKCYFAKHKL VWEVLDGGLK SKIEIQWSDI CALKVVCPET EPGTLEIALS RQPLFFRETN
201: PQPRKHTLWQ ATSDFTAGQA SRHRRHFLQC APGMMNKHVE KLVHCDPRLC SLSQQNDITL ENPYFESRSS IFEDPDDVKC QNFVHNKDDD DQLTPQRFRE
301: LLQHHSASGR IDAEERQEAG TSDGLARDFS NSVADGQVIK QDDGSSVGEP HTSILLSWNG FKLPGIQRSM SKSEIANHIG HHIYRHMYSG DLPAADGGAG
401: TSGKLAIDDI TRYLLNDSQI LDSGNDSTGK LAFDEMTRQL LNDSQITIAA DERMLMSRVN SLCSLIHRDS CTGQVNPGVH SDNNEIYERK PQAYAPPVEG
501: DSGNGSLPPR QEPFGDLLTH LPRISSFPHF L
001: MVEMRKSGGL RPESESAARC RDELPVKLEI AEDDLEEEHG PLNKRSRLWS PGTSSSTMAP AKYNPLDEPS PLGLSLKKSP SLLELIQMKI THCGDPKAAE
101: TLKAGALGSG LKRESKTIAA AASVGPTLAP GSIEKLKASN FPASLLKIGQ WEYKSRYEGD LVAKCYFAKH KLVWEVLEQG LKSKIEIQWS DIMALKANCP
201: EDGPGTLTLV LARQPLFFRE TNPQPRKHTL WQATSDFTDG QASMNRQHFL QCAQGIMNKH FEKLVQCDHR LFHLSRQPEI AIDSPYFDAR QSIFEDPSES
301: KGHPFGNLNL STGPSISGTQ NLASPVGAQS SSEHMYLSHE APSPSSVIDA RANEGIGGSE AVNSRNRTDC GQIEAPGIHQ SMSLSDFLAV LCDTKNTTDL
401: NLADDVDGLH QSMSVSDFVA YLSDSRNITD SDQIKVPGLH QSMSVSDFVG LLSDSAGGSH PEHMEKFEIM KQQLLSDNIQ FEAPDEKSLM PRVNSLFNLL
501: YKDPNVAANS QLNTEMSVGL KSEPKGIVSD NNNNNNNNNR VLDTASSSKP QGMLRKDSFS DLLLHLPRIT SLPKFLSNIS EEDGDAYNR
101: TLKAGALGSG LKRESKTIAA AASVGPTLAP GSIEKLKASN FPASLLKIGQ WEYKSRYEGD LVAKCYFAKH KLVWEVLEQG LKSKIEIQWS DIMALKANCP
201: EDGPGTLTLV LARQPLFFRE TNPQPRKHTL WQATSDFTDG QASMNRQHFL QCAQGIMNKH FEKLVQCDHR LFHLSRQPEI AIDSPYFDAR QSIFEDPSES
301: KGHPFGNLNL STGPSISGTQ NLASPVGAQS SSEHMYLSHE APSPSSVIDA RANEGIGGSE AVNSRNRTDC GQIEAPGIHQ SMSLSDFLAV LCDTKNTTDL
401: NLADDVDGLH QSMSVSDFVA YLSDSRNITD SDQIKVPGLH QSMSVSDFVG LLSDSAGGSH PEHMEKFEIM KQQLLSDNIQ FEAPDEKSLM PRVNSLFNLL
501: YKDPNVAANS QLNTEMSVGL KSEPKGIVSD NNNNNNNNNR VLDTASSSKP QGMLRKDSFS DLLLHLPRIT SLPKFLSNIS EEDGDAYNR
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9SUG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.