Factsheet for TraesCS5D01G004300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

plastid: 16595579
golgi: 23128297
golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G000660.2	Barley	extracellular	87.16	76.33
TraesCS7D01G504800.1	Wheat	extracellular	59.46	59.06
TraesCS5D01G004100.1	Wheat	golgi	58.78	58.78
TraesCS5D01G004000.1	Wheat	golgi	52.03	46.95

Protein Annotations

EnsemblPlants:TraesCS5D01G004300.1	EnsemblPlantsGene:TraesCS5D01G004300	Gene3D:1.10.110.10	GO:GO:0003674	GO:GO:0004867	GO:GO:0030234
InterPro:Allergen/soft/tryp_amyl_inhib	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	PANTHER:PTHR33454	PFAM:PF00234	PRINTS:PR00808
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TIGR:cd00261	MapMan:35.1

Description

No Description!

Coordinates

chr5D:+:3609640..3610146

Molecular Weight (calculated)

16793.3 Da

IEP (calculated)

8.860

GRAVY (calculated)

-0.364

Length

148 amino acids

Sequence
(BLAST)

001: MKTLFLLALL ALVASTTFAQ YSEVGGWYNE VGGGGGSQQC PQERPKLSSC KDYVMERCFT MKDFPVTWPT KWWKGGCEHE VREKCCKQLS QIAPQCRCDS
101: IRRVIQGRLG GFLGIWRGEV FKQLQRAQSL PSKCNMGADC KFPSGYYW

Best Arabidopsis Sequence Match ( AT5G54740.1 )
(BLAST)

001: MAKLILVFAT LALFILLANA SIYRTVVEFE EDDDVSNPQQ GKCQREFMKH QQLRGCKQWI RKRAQQGRIG YEADDFELTL DVDLEDDENP MGPQQQSSLK
101: MCCNELRQVD KMCVCPTLKK AAQQVRFQGM HGQQQVQHVF QTAKNLPNVC KIPTVGSCQF KASPY

Arabidopsis Description

SESA5SESA5 [Source:UniProtKB/TrEMBL;Acc:A0A178UNV4]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.