Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G369300.1 | Wheat | cytosol | 89.64 | 90.94 |
| Zm00001d018461_P001 | Maize | cytosol | 75.0 | 79.55 |
| EES07741 | Sorghum | cytosol | 73.57 | 77.74 |
| Os02t0814000-01 | Rice | cytosol | 68.93 | 76.59 |
| TraesCS6B01G423700.1 | Wheat | plastid | 39.64 | 74.5 |
| TraesCS1A01G151600.1 | Wheat | mitochondrion | 50.71 | 33.49 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G384300.1 | EnsemblPlantsGene:TraesCS6A01G384300 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF16 |
| PFAM:PF05903 | SEG:seg | SMART:SM01179 | MapMan:19.2.3.2.5 | MapMan:19.4.1.7 | : |
Description
No Description!
Coordinates
chr6A:-:602814931..602816001
Molecular Weight (calculated)
29492.1 Da
IEP (calculated)
6.365
GRAVY (calculated)
-0.121
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEGHKVAL NVYDLSNGLA RQLSTSFLGK PIEAIWHTGV VVYGNEYFFG GGIQAAPAGA TQYGRPVRVV DLGVTHLPRE VFEDYLRDIA PRYTAATYSL
101: LTHNCNNFSN EVAQFLVGAG IPDYILNLPN EVMSSPMGAM IMPMIQNLEA TLRNNAAPQT TQFVPTPASV SVPQPAAASK TPAAPTSSTT AAAASAAPVG
201: SSSKKEEEKK VEKQTPEKAA AAAAPTVADP LGSARGKVQE EVMREFAALM ASGTLRASEA AALAMRRVME RHGDGASMQA
101: LTHNCNNFSN EVAQFLVGAG IPDYILNLPN EVMSSPMGAM IMPMIQNLEA TLRNNAAPQT TQFVPTPASV SVPQPAAASK TPAAPTSSTT AAAASAAPVG
201: SSSKKEEEKK VEKQTPEKAA AAAAPTVADP LGSARGKVQE EVMREFAALM ASGTLRASEA AALAMRRVME RHGDGASMQA
001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.