Factsheet for TraesCS1A01G151600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G148600.1	Wheat	mitochondrion	83.49	83.29
TraesCS1B01G169200.1	Wheat	mitochondrion	70.28	71.63
Os10t0472400-01	Rice	cytosol	42.45	61.86
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	39.39	60.29
GSMUA_Achr5P12910_001	Banana	cytosol	34.67	58.33
KXG38351	Sorghum	mitochondrion	44.81	56.55
KRG99787	Soybean	cytosol	33.73	51.25
PGSC0003DMT400045523	Potato	cytosol	33.02	51.09
VIT_07s0005g06420.t01	Wine grape	cytosol	33.25	50.9
TraesCS6A01G384300.1	Wheat	cytosol	33.49	50.71
Solyc09g061310.2.1	Tomato	cytosol	32.78	50.36
Zm00001d014043_P001	Maize	mitochondrion	38.21	50.31
AT3G07090.1	Thale cress	cytosol	30.9	49.43
HORVU1Hr1G040160.10	Barley	cytosol, nucleus	63.68	48.65
KRH46754	Soybean	cytosol	32.08	48.57
Bra040360.1-P	Field mustard	cytosol	27.36	47.93
Bra029621.1-P	Field mustard	cytosol	30.9	47.81
CDY34915	Canola	cytosol	27.83	47.58
CDY66750	Canola	cytosol	27.59	47.37
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	34.2	46.62
CDX82731	Canola	cytosol, extracellular, plastid	5.66	40.0
CDY65594	Canola	cytosol, extracellular, plastid	9.67	39.81
CDY05315	Canola	mitochondrion	30.19	39.63
CDY65492	Canola	cytosol	8.96	37.25

Protein Annotations

EnsemblPlants:TraesCS1A01G151600.1	EnsemblPlantsGene:TraesCS1A01G151600	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF16
PFAM:PF05903	SEG:seg	SMART:SM01179	MapMan:19.2.3.2.5	MapMan:19.4.1.7	:

Description

No Description!

Coordinates

chr1A:+:260836990..260839901

Molecular Weight (calculated)

45019.3 Da

IEP (calculated)

6.015

GRAVY (calculated)

-0.378

Length

424 amino acids

Sequence
(BLAST)

001: MAKPRRSRFT FAGCGCFGGQ ARGKVAEDEY PVKLHIYDLS RGMARQLSTT VLGKPIDAIW HTGVVVHGKE YFFGGGVQQD RPGRTPYGTP ARVEHFGVTH
101: VGKEDFEDFL HEISPRYTPE TYNLLSNNCN HFSNEVVKFL VGSTVPSYIL DQPKEAMKSP IGALIMPMIQ GLETTMKAGA APQQPPQFVP APAAAAQTQP
201: STNNIQMQSR SVTADEPGAD KTADHDSGII PAPKEAGEVQ PSASSTQNEI ATDETVSNDG IIPPVVVLLT PKGAGQTQPS MNKDQIESRS VTANETGADE
301: MVDSDGGIIP PPAKPAAPAA ATQTETSINS IELHTVDEGT RMVTPPAVQP AAPAATVAKV TLPAAAASDP LGEAKRRAQE ELKQEFVAIM ATGTVQAGDA
401: AALAMRRVME RHGLRRTTVP TQRG

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.