Factsheet for Zm00001d014043_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38351	Sorghum	mitochondrion	72.05	69.05
GSMUA_Achr5P12910_001	Banana	cytosol	48.76	62.3
Os10t0472400-01	Rice	cytosol	54.97	60.82
VIT_07s0005g06420.t01	Wine grape	cytosol	48.45	56.32
PGSC0003DMT400045523	Potato	cytosol	47.83	56.2
Zm00001d018461_P001	Maize	cytosol	45.96	56.06
Solyc09g061310.2.1	Tomato	cytosol	47.2	55.07
KRG99787	Soybean	cytosol	47.2	54.48
AT3G07090.1	Thale cress	cytosol	44.72	54.34
Bra040360.1-P	Field mustard	cytosol	40.37	53.72
Bra029621.1-P	Field mustard	cytosol	45.65	53.65
KRH46754	Soybean	cytosol	46.58	53.57
CDY66750	Canola	cytosol	40.68	53.04
CDY34915	Canola	cytosol	40.68	52.82
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	48.14	49.84
CDX82731	Canola	cytosol, extracellular, plastid	8.7	46.67
CDY65594	Canola	cytosol, extracellular, plastid	14.91	46.6
CDY05315	Canola	mitochondrion	45.96	45.82
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	33.54	38.99
TraesCS1B01G169200.1	Wheat	mitochondrion	50.31	38.94
CDY65492	Canola	cytosol	12.11	38.24
TraesCS1A01G151600.1	Wheat	mitochondrion	50.31	38.21
TraesCS1D01G148600.1	Wheat	mitochondrion	50.31	38.12
HORVU1Hr1G040160.10	Barley	cytosol, nucleus	50.62	29.37

Protein Annotations

EnsemblPlants:Zm00001d014043_P001	EnsemblPlants:Zm00001d014043_T001	EnsemblPlantsGene:Zm00001d014043	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378
PANTHER:PTHR12378:SF16	PFAM:PF05903	ProteinID:AQK65128.1	SEG:seg	SMART:SM01179	UniParc:UPI00084447D1
UniProt:A0A1D6GPN1	MapMan:19.2.3.2.5	MapMan:19.4.1.7	:	:	:

Description

PPPDE peptidase domain-containing protein 2

Coordinates

chr5:-:30420457..30425053

Molecular Weight (calculated)

33957.7 Da

IEP (calculated)

5.398

GRAVY (calculated)

-0.049

Length

322 amino acids

Sequence
(BLAST)

001: MAKRRSTFGL ARFGCCGSQQ AREEKMTEDG YPVKLHVYDL SQGMARQLPA TIVGREAIEA IWHTGVVVYG REYYFGGGIQ EGQPGRTPYG TPVRVEDLGV
101: THVPREVFEE FLREIGPRYY TLATYKLLNH NCNSFSNEAA QFLAGSAIPS YILELPNQVM NSPVGALILP MIQGLEASLG AGAVPQPPQF RPVLAPLGAA
201: TVALPLTDDV EPGSAAADEP EAAKIAGASD GTPVPLSVQP AAAPAAAAAQ ASAVPTVSSM LVPPDPHAEA KSRVQEEIKR EFADIMAAGT ARAGEAAALA
301: TRRVMERHGA GVISGPMPLV MT

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.