Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82731 | Canola | cytosol, extracellular, plastid | 45.63 | 78.33 |
| CDY66750 | Canola | cytosol | 68.93 | 28.74 |
| CDY34915 | Canola | cytosol | 66.02 | 27.42 |
| AT3G07090.1 | Thale cress | cytosol | 66.99 | 26.04 |
| GSMUA_Achr5P12910_001 | Banana | cytosol | 55.34 | 22.62 |
| CDY05315 | Canola | mitochondrion | 70.87 | 22.6 |
| PGSC0003DMT400045523 | Potato | cytosol | 56.31 | 21.17 |
| Solyc09g061310.2.1 | Tomato | cytosol | 56.31 | 21.01 |
| VIT_07s0005g06420.t01 | Wine grape | cytosol | 53.4 | 19.86 |
| KRG99787 | Soybean | cytosol | 52.43 | 19.35 |
| KRH46754 | Soybean | cytosol | 49.51 | 18.21 |
| Os10t0472400-01 | Rice | cytosol | 43.69 | 15.46 |
| GSMUA_Achr4P26480_001 | Banana | cytosol, mitochondrion, plasma membrane | 46.6 | 15.43 |
| Zm00001d014043_P001 | Maize | mitochondrion | 46.6 | 14.91 |
| KXG38351 | Sorghum | mitochondrion | 46.6 | 14.29 |
| TraesCS1B01G169200.1 | Wheat | mitochondrion | 42.72 | 10.58 |
| TraesCS1D01G148600.1 | Wheat | mitochondrion | 40.78 | 9.88 |
| TraesCS1A01G151600.1 | Wheat | mitochondrion | 39.81 | 9.67 |
| HORVU1Hr1G040160.10 | Barley | cytosol, nucleus | 42.72 | 7.93 |
| HORVU1Hr1G040180.1 | Barley | cytosol, nucleus | 19.42 | 7.22 |
| CDY65492 | Canola | cytosol | 2.91 | 2.94 |
Protein Annotations
| EnsemblPlants:CDY65594 | EnsemblPlantsGene:GSBRNA2T00046885001 | InterPro:PPPDE_dom | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF16 | ProteinID:CDY65594 |
| ProteinID:CDY65594.1 | UniParc:UPI0004EF0694 | UniProt:A0A078JFW9 | MapMan:35.2 | : | : |
Description
BnaAnng20680DBnaAnng20680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFW9]
Coordinates
chrLK034852:+:7453..7914
Molecular Weight (calculated)
11192.3 Da
IEP (calculated)
4.477
GRAVY (calculated)
-0.484
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSPMGGLLM PMIQNLETTL RAGAVPNAPQ FWPQTEPFGA FSKDEVPTEK APQVSQASSN KEKVKEDPLG DARTKIQEEI TREFAALMEQ GTLRASEAAV
101: MAT
101: MAT
001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.