CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014043_P001	Maize	mitochondrion	69.05	72.05
Os10t0472400-01	Rice	cytosol	59.82	69.07
GSMUA_Achr5P12910_001	Banana	cytosol	49.7	66.27
PGSC0003DMT400045523	Potato	cytosol	49.4	60.58
KRG99787	Soybean	cytosol	50.3	60.57
VIT_07s0005g06420.t01	Wine grape	cytosol	49.4	59.93
Solyc09g061310.2.1	Tomato	cytosol	49.11	59.78
EES07741	Sorghum	cytosol	46.73	59.25
AT3G07090.1	Thale cress	cytosol	45.83	58.11
KRH46754	Soybean	cytosol	47.62	57.14
Bra040360.1-P	Field mustard	cytosol	39.29	54.55
Bra029621.1-P	Field mustard	cytosol	44.05	54.01
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	49.7	53.7
CDY66750	Canola	cytosol	39.29	53.44
CDY34915	Canola	cytosol	39.29	53.23
CDY65594	Canola	cytosol, extracellular, plastid	14.29	46.6
CDY05315	Canola	mitochondrion	44.64	46.44
TraesCS1A01G151600.1	Wheat	mitochondrion	56.55	44.81
TraesCS1B01G169200.1	Wheat	mitochondrion	55.06	44.47
TraesCS1D01G148600.1	Wheat	mitochondrion	55.06	43.53
CDX82731	Canola	cytosol, extracellular, plastid	7.74	43.33
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	35.71	43.32
CDY65492	Canola	cytosol	11.31	37.25
HORVU1Hr1G040160.10	Barley	cytosol, nucleus	54.46	32.97

Protein Annotations

EnsemblPlants:KXG38351	EnsemblPlantsGene:SORBI_3001G222200	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF16
PFAM:PF05903	ProteinID:KXG38351	ProteinID:KXG38351.1	SEG:seg	SMART:SM01179	UniParc:UPI00081ACDAF
UniProt:A0A1B6QKA6	MapMan:19.2.3.2.5	MapMan:19.4.1.7	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:21126170..21130232

Molecular Weight (calculated)

35155.9 Da

IEP (calculated)

9.489

GRAVY (calculated)

-0.170

Length

336 amino acids

Sequence
(BLAST)

001: MAKRRSRFGL ARFSCFGGQA RAEKMAEDGY PVKLHIYDLS QGMARQLSAT ILGKAIEAIW HTGVVVYGRE YYFGGGIQQG QPGRTPYGTP IRVEDLGVTH
101: VPREVFEEFL REIGPRYTPA TYKLLSHNCN NFSNEVAQFL AGAAIPSYIL ELPNQVMNSP VGALILPMIQ GLEASLGAGA VPQPPQFRPA PAAPVGAATV
201: TRPLTTKDDV VPRSTTADDD KPEAAKTAAG NNGSANDSTA VVPPAVQPAA APATSAGEVS SAAPTTVSTK LAAPPPPDPL AAAKSRVQEE IKREFAAIMA
301: AGTARAGEAA ALATRRVMER HGLQRAAAAA AAAHRG

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.