Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G040160.10 | Barley | cytosol, nucleus | 84.48 | 42.16 |
| TraesCS1A01G151600.1 | Wheat | mitochondrion | 60.29 | 39.39 |
| TraesCS1B01G169200.1 | Wheat | mitochondrion | 58.48 | 38.94 |
| GSMUA_Achr5P12910_001 | Banana | cytosol | 35.38 | 38.89 |
| Os10t0472400-01 | Rice | cytosol | 40.43 | 38.49 |
| TraesCS1D01G148600.1 | Wheat | mitochondrion | 58.84 | 38.35 |
| KXG38351 | Sorghum | mitochondrion | 43.32 | 35.71 |
| CDY34915 | Canola | cytosol | 31.77 | 35.48 |
| PGSC0003DMT400045523 | Potato | cytosol | 35.02 | 35.4 |
| CDY66750 | Canola | cytosol | 31.41 | 35.22 |
| Solyc09g061310.2.1 | Tomato | cytosol | 35.02 | 35.14 |
| Bra040360.1-P | Field mustard | cytosol | 30.69 | 35.12 |
| VIT_07s0005g06420.t01 | Wine grape | cytosol | 34.3 | 34.3 |
| AT3G07090.1 | Thale cress | cytosol | 32.49 | 33.96 |
| KRG99787 | Soybean | cytosol | 33.94 | 33.69 |
| Zm00001d014043_P001 | Maize | mitochondrion | 38.99 | 33.54 |
| CDX82731 | Canola | cytosol, extracellular, plastid | 7.22 | 33.33 |
| Bra029621.1-P | Field mustard | cytosol | 32.85 | 33.21 |
| KRH46754 | Soybean | cytosol | 33.21 | 32.86 |
| GSMUA_Achr4P26480_001 | Banana | cytosol, mitochondrion, plasma membrane | 36.1 | 32.15 |
| CDY05315 | Canola | mitochondrion | 33.57 | 28.79 |
| CDY65492 | Canola | cytosol | 9.75 | 26.47 |
| CDY65594 | Canola | cytosol, extracellular, plastid | 7.22 | 19.42 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G040180.1 | EnsemblPlantsGene:HORVU1Hr1G040180 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF16 |
| PFAM:PF05903 | SEG:seg | SMART:SM01179 | UniParc:UPI000B46EA27 | UniProt:A0A287F8A0 | MapMan:19.2.3.2.5 |
| MapMan:19.4.1.7 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:284411915..284413903
Molecular Weight (calculated)
30319.2 Da
IEP (calculated)
10.306
GRAVY (calculated)
-0.564
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: VLSTPRNADR RSRRRGETPA QERKKETKKP KAVESLTSTE PTSIPTPWPC FYPTTTPSGA CKLHPTSSDM AKPRRSRFAF AGCGCFGGGQ ARGKVAEDEY
101: PVKLHIYDIS RGMARQLSTT VLGKAIEAVW AHRRGGSWQR VLLRGGIQQG RPGRTPYGTP ARVEHFGVTH VAKEDFEGFL QEMSPRYTPE TYNLLTNNCN
201: HFSNEVVKFL VGSTIPSYIL DQPKEAMKSP IGALIMPMIQ GLETTLRAGA AIQPPQSVLA PAAAAQTQPS TKSTPNE
101: PVKLHIYDIS RGMARQLSTT VLGKAIEAVW AHRRGGSWQR VLLRGGIQQG RPGRTPYGTP ARVEHFGVTH VAKEDFEGFL QEMSPRYTPE TYNLLTNNCN
201: HFSNEVVKFL VGSTIPSYIL DQPKEAMKSP IGALIMPMIQ GLETTLRAGA AIQPPQSVLA PAAAAQTQPS TKSTPNE
001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.