Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34915 | Canola | cytosol | 97.52 | 95.16 |
| CDY66750 | Canola | cytosol | 97.11 | 95.14 |
| Bra029621.1-P | Field mustard | cytosol | 84.71 | 74.82 |
| AT3G07090.1 | Thale cress | cytosol | 79.34 | 72.45 |
| GSMUA_Achr5P12910_001 | Banana | cytosol | 64.46 | 61.9 |
| VIT_07s0005g06420.t01 | Wine grape | cytosol | 69.01 | 60.29 |
| PGSC0003DMT400045523 | Potato | cytosol | 66.53 | 58.76 |
| Solyc09g061310.2.1 | Tomato | cytosol | 66.12 | 57.97 |
| KRH46754 | Soybean | cytosol | 66.94 | 57.86 |
| KRG99787 | Soybean | cytosol | 66.12 | 57.35 |
| GSMUA_Achr4P26480_001 | Banana | cytosol, mitochondrion, plasma membrane | 59.09 | 45.98 |
| Os10t0472400-01 | Rice | cytosol | 52.07 | 43.3 |
| Zm00001d014043_P001 | Maize | mitochondrion | 53.72 | 40.37 |
| KXG38351 | Sorghum | mitochondrion | 54.55 | 39.29 |
| HORVU1Hr1G040180.1 | Barley | cytosol, nucleus | 35.12 | 30.69 |
| TraesCS1B01G169200.1 | Wheat | mitochondrion | 50.0 | 29.09 |
| TraesCS1D01G148600.1 | Wheat | mitochondrion | 48.76 | 27.76 |
| TraesCS1A01G151600.1 | Wheat | mitochondrion | 47.93 | 27.36 |
| HORVU1Hr1G040160.10 | Barley | cytosol, nucleus | 50.0 | 21.8 |
Protein Annotations
| EnsemblPlants:Bra040360.1 | EnsemblPlants:Bra040360.1-P | EnsemblPlantsGene:Bra040360 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | PANTHER:PTHR12378 |
| PANTHER:PTHR12378:SF16 | PFAM:PF05903 | SMART:SM01179 | UniParc:UPI0002544934 | UniProt:M4FGY2 | MapMan:19.2.3.2.5 |
| MapMan:19.4.1.7 | : | : | : | : | : |
Description
AT3G07090 (E=2e-081) | unknown protein
Coordinates
chrA01:+:28008693..28009780
Molecular Weight (calculated)
26363.6 Da
IEP (calculated)
5.626
GRAVY (calculated)
-0.254
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEAHKVTL NVYDLSQLSA SLLGKVIEGV WHTGIVVYGN EYFFGGGIQH LPAGTTPYGA PLRTVEMGET HVPKDVFEMY LEEISPRYTA ESYNLITHNC
101: NNFSNEVSQF LVGKGIPDYI LQLPSEVMNS PMGGLLMPMI QNLEATLRAG AVPNAPQFKP KSQPVGPNPS EKASESPVVV QPSASKEKVK EDPLGDARTK
201: IQEEITREFA SLMAQGTLRA SEAATIATKR VMQKYGHLNV SA
101: NNFSNEVSQF LVGKGIPDYI LQLPSEVMNS PMGGLLMPMI QNLEATLRAG AVPNAPQFKP KSQPVGPNPS EKASESPVVV QPSASKEKVK EDPLGDARTK
201: IQEEITREFA SLMAQGTLRA SEAATIATKR VMQKYGHLNV SA
001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.