Factsheet for TraesCS1B01G169200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G148600.1	Wheat	mitochondrion	82.21	80.47
TraesCS1A01G151600.1	Wheat	mitochondrion	71.63	70.28
Os10t0472400-01	Rice	cytosol	44.23	63.23
GSMUA_Achr5P12910_001	Banana	cytosol	36.54	60.32
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	38.94	58.48
KXG38351	Sorghum	mitochondrion	44.47	55.06
VIT_07s0005g06420.t01	Wine grape	cytosol	36.06	54.15
HORVU1Hr1G040160.10	Barley	cytosol, nucleus	72.12	54.05
PGSC0003DMT400045523	Potato	cytosol	35.1	53.28
KRG99787	Soybean	cytosol	35.34	52.69
Solyc09g061310.2.1	Tomato	cytosol	34.62	52.17
AT3G07090.1	Thale cress	cytosol	32.69	51.32
Zm00001d014043_P001	Maize	mitochondrion	38.94	50.31
Bra040360.1-P	Field mustard	cytosol	29.09	50.0
KRH46754	Soybean	cytosol	33.41	49.64
Bra029621.1-P	Field mustard	cytosol	32.45	49.27
CDY34915	Canola	cytosol	29.33	49.19
CDY66750	Canola	cytosol	29.09	48.99
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	36.06	48.23
CDY65594	Canola	cytosol, extracellular, plastid	10.58	42.72
CDX82731	Canola	cytosol, extracellular, plastid	6.01	41.67
CDY05315	Canola	mitochondrion	31.49	40.56
TraesCS6B01G423700.1	Wheat	plastid	14.18	39.6
CDY65492	Canola	cytosol	9.13	37.25

Protein Annotations

EnsemblPlants:TraesCS1B01G169200.1	EnsemblPlantsGene:TraesCS1B01G169200	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF16
PFAM:PF05903	SEG:seg	SMART:SM01179	MapMan:19.2.3.2.5	MapMan:19.4.1.7	:

Description

No Description!

Coordinates

chr1B:+:300331717..300334701

Molecular Weight (calculated)

43821.8 Da

IEP (calculated)

5.445

GRAVY (calculated)

-0.332

Length

416 amino acids

Sequence
(BLAST)

001: MAKPRRSRFA FAGCGCFGGQ LRGKVAEDEY PVKLHIYDLS QGMARQLSTT VLGKPIDAIW HTGVVVHGKE YFFGGGIQQD RPGRTPYGTP ARVEHFGVTH
101: VAKEDFEDFL QEISPRYTPE TYNLLSNNCN HFSNEVVKFL VGSTVPSYIL DQPKEAMKSP IGALIMPMIQ GLETTMKAGA APQQPPQFVP APAAGAQIQS
201: RSVTADEPGA DKTADHDSGI IPAPKEAGQV QPSASSTQDE IATDETVSND GGIIPPVVVL PTPKGVGQTQ PSTNNDQIES RSVTANETGA DEMVNSDGGI
301: IPPPAKPAAP AAATQTETSL NSIELQTVDE GTRMVTPPAV QPAAPAATVA KVTLPAAAAS DPLGGAKSRA QEEIKQEFAA IMATGTVQAG DAAALAMRRV
401: MERHGLRRTA VPTQRG

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.