Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34915 | Canola | cytosol | 53.92 | 22.18 |
| CDY66750 | Canola | cytosol | 51.96 | 21.46 |
| AT3G07090.1 | Thale cress | cytosol | 50.0 | 19.25 |
| VIT_07s0005g06420.t01 | Wine grape | cytosol | 45.1 | 16.61 |
| CDY05315 | Canola | mitochondrion | 51.96 | 16.41 |
| KRG99787 | Soybean | cytosol | 44.12 | 16.13 |
| KRH46754 | Soybean | cytosol | 44.12 | 16.07 |
| GSMUA_Achr5P12910_001 | Banana | cytosol | 38.24 | 15.48 |
| PGSC0003DMT400045523 | Potato | cytosol | 41.18 | 15.33 |
| Solyc09g061310.2.1 | Tomato | cytosol | 41.18 | 15.22 |
| Os10t0472400-01 | Rice | cytosol | 38.24 | 13.4 |
| GSMUA_Achr4P26480_001 | Banana | cytosol, mitochondrion, plasma membrane | 40.2 | 13.18 |
| Zm00001d014043_P001 | Maize | mitochondrion | 38.24 | 12.11 |
| KXG38351 | Sorghum | mitochondrion | 37.25 | 11.31 |
| HORVU1Hr1G040180.1 | Barley | cytosol, nucleus | 26.47 | 9.75 |
| TraesCS1B01G169200.1 | Wheat | mitochondrion | 37.25 | 9.13 |
| TraesCS1A01G151600.1 | Wheat | mitochondrion | 37.25 | 8.96 |
| TraesCS1D01G148600.1 | Wheat | mitochondrion | 37.25 | 8.94 |
| HORVU1Hr1G040160.10 | Barley | cytosol, nucleus | 39.22 | 7.21 |
| CDY65594 | Canola | cytosol, extracellular, plastid | 2.94 | 2.91 |
| CDX82731 | Canola | cytosol, extracellular, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY65492 | EnsemblPlantsGene:GSBRNA2T00046700001 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | KEGG:00261+3.4.-.- | KEGG:00310+3.4.-.- |
| KEGG:00550+3.4.-.- | KEGG:00780+3.4.-.- | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF7 | PFAM:PF05903 | ProteinID:CDY65492 |
| ProteinID:CDY65492.1 | UniParc:UPI0004EEE483 | UniProt:A0A078JJH1 | MapMan:35.2 | : | : |
Description
BnaCnng47270DBnaCnng47270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJH1]
Coordinates
chrLK034813:-:595..1236
Molecular Weight (calculated)
11211.4 Da
IEP (calculated)
5.075
GRAVY (calculated)
-0.188
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPALEQEVK LRDNEKEKGE WTLHLDGSSN VGVWHTGIVV YGNEYFFGGG IQYLPAGTTP YGAPLRTVEL GESHVPKDGP VRLLTQVIHL GEDATRCSFC
101: VL
101: VL
001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.