CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46754	Soybean	cytosol	87.1	86.79
PGSC0003DMT400045523	Potato	cytosol	69.89	71.17
VIT_07s0005g06420.t01	Wine grape	cytosol	70.25	70.76
Solyc09g061310.2.1	Tomato	cytosol	69.18	69.93
GSMUA_Achr5P12910_001	Banana	cytosol	63.08	69.84
Bra040360.1-P	Field mustard	cytosol	57.35	66.12
Bra029621.1-P	Field mustard	cytosol	64.16	65.33
CDY34915	Canola	cytosol	57.71	64.92
AT3G07090.1	Thale cress	cytosol	61.65	64.91
CDY66750	Canola	cytosol	57.35	64.78
GSMUA_Achr4P26480_001	Banana	cytosol, mitochondrion, plasma membrane	60.57	54.34
CDY05315	Canola	mitochondrion	62.01	53.56
Os10t0472400-01	Rice	cytosol	54.84	52.58
CDY65594	Canola	cytosol, extracellular, plastid	19.35	52.43
CDX82731	Canola	cytosol, extracellular, plastid	11.11	51.67
KXG38351	Sorghum	mitochondrion	60.57	50.3
Zm00001d014043_P001	Maize	mitochondrion	54.48	47.2
CDY65492	Canola	cytosol	16.13	44.12
TraesCS1B01G169200.1	Wheat	mitochondrion	52.69	35.34
HORVU1Hr1G040180.1	Barley	cytosol, nucleus	33.69	33.94
TraesCS1D01G148600.1	Wheat	mitochondrion	51.61	33.88
TraesCS1A01G151600.1	Wheat	mitochondrion	51.25	33.73
HORVU1Hr1G040160.10	Barley	cytosol, nucleus	52.69	26.49

Protein Annotations

EMBL:ACUP02011303	EMBL:BT097189	EnsemblPlants:KRG99787	EnsemblPlantsGene:GLYMA_18G170900	EntrezGene:100799161	Gene3D:3.90.1720.30
InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF16	PFAM:PF05903	ProteinID:KRG99787	ProteinID:KRG99787.1
SMART:SM01179	UniParc:UPI0001B167B1	UniProt:C6THR3	MapMan:19.2.3.2.5	MapMan:19.4.1.7	:

Description

hypothetical protein

Coordinates

chr18:-:40169443..40172523

Molecular Weight (calculated)

30095.8 Da

IEP (calculated)

6.362

GRAVY (calculated)

-0.271

Length

279 amino acids

Sequence
(BLAST)

001: MAEEGCRVTL NVYDLSQGLA RQLSMSFLGK AIEGIWHTGV VVYGNEYYFG GGIQHSPAGL TPYGTPLRVV DLGVTHVPKD VFEMYLQEIS PRYLPETYSL
101: LTHNCNNFSN EVAQFLVGAS IPEYILQLPN EVMSSPMGAL ILPMIQNLET TLKSGAVPQV PQFRPSTTLN ASANTQKNSS ISNSSTENVV SREVNKEVKG
201: KDEKAASPSA KPAGEPQKSS PNGVTADPLG DARNKVQDEI LKEFAAIMAS GTMRASEAAA LATKRVMQRY GHTTAVSQN

Best Arabidopsis Sequence Match ( AT3G07090.1 )
(BLAST)

001: MAEEAHKVTL NVYDLSQGLA RQLSQSLLGK VIEGVWHTGI VVYGNEYFFG GGIQHLPVGR TPYGTPIRTI ELGLSHVPKD VFEMYLEEIS PRYTAESYNL
101: LTHNCNNFSN EVAQFLVGKG IPDYILQLPN DVLNSPMGGL IMPMLQGLET TLKAGAVPQV PQFRPQPQPF GAFSKDDGPQ IVIAPKLEAA ETSTATEKVP
201: PVIQPSASKE KVKDDPLGDA RAKIQEEITS EFAALMAQGT LRASEAAAMA TKRVMQKYGH LNVNA

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFT9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.